Problem with automation is I could create dozens of templates over the next several years and consume less time in aggregate than it would take me to automate this. Nonetheless, there is a documentation component here that is important so I did enough to document - if someone wants to automate from there feel free.
The template is just a copy of the sqlite database after a fresh Galaxy is launched. I usually just do this against whatever development instance of Galaxy I am working on. For completeness though I have put together a script to automate this task against a fresh install (I think): https://github.com/jmchilton/galaxy-downloads/blob/master/build_sqlite_template.sh Good luck! -John On Tue, Jul 22, 2014 at 4:13 PM, Peter Cock <p.j.a.c...@googlemail.com> wrote: > On Tue, Jul 22, 2014 at 7:41 PM, Eric Rasche <rasche.e...@yandex.ru> wrote: >> John, >> >> How are those generated? Would you be amenable to scripting that >> portion and running it once a month? (...say in a cron job, with a >> passwordless ssh key so you never have to touch it again) >> >> Cheers, >> Eric > > How to generate it was going to be my next question too ;) > > I'm impressed with Eric's zeal to automate things. Having a script > for making the SQLite template would be good - under git in the > same repository? > > Peter > > P.S. The schema version 120 template works great, thanks!: > > https://travis-ci.org/peterjc/pico_galaxy/builds/30592828 > https://travis-ci.org/peterjc/galaxy_blast/builds/30592097 ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
