On Mon, Jul 28, 2014 at 11:03 AM, Wolfgang Maier
<wolfgang.ma...@biologie.uni-freiburg.de> wrote:
> Dear all,
> I noticed that with params of type "text" Galaxy seems to replace certain
> characters before passing them to the shell. As examples, it changes "@" to
> "__at__", "}" to "__cc__" and "\" to "X".
> Is this the standard behavior or am I doing something wrong ? And if it's
> standard, are there workarounds ?
> Best,
> Wolfgang

This is standard behaviour to prevent special characters being used
to construct malicious command lines. It can be configured within
your tool definition using the <sanitizer> tag set:


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