Bjorn We'd be interested in this tool, as well. Any idea how close to functional it is? I see it's only on TEST toolshed, and not on production, at this point.
I don't see any related Trello card when searching on "star" Regards, Curtis Galaxy Admin @ University of Alabama at Birmingham -----Original Message----- From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Björn Grüning Sent: Wednesday, September 24, 2014 3:15 PM To: galaxy-dev@lists.bx.psu.edu; hoove...@helix.nih.gov >> David Hoover Subject: Re: [galaxy-dev] tool for STAR RNA-seq aligner Hi David, yes there is inital code in the https://testtoolshed.g2.bx.psu.edu/. I think Ross has done some work on it. The main problem with Star is that is needs special indices (and a lot of it) and it would be great to offer data managers for it. Cheers, Bjoern Am 24.09.2014 um 22:05 schrieb David Hoover: > Hi, > > I am developing a tool for STAR (https://code.google.com/p/rna-star/), and I > realize I may be reinventing another wheel. Has anyone else created a tool > for STAR? There's nothing else in the toolsheds for it yet. > > David > > -------------------- > David Hoover, PhD > Helix Systems Staff > SCB/DCSS/CIT/NIH > 301-435-2986 > http://helix.nih.gov > > > > > > ___________________________________________________________ > Please keep all replies on the list by using "reply all" > in your mail client. To manage your subscriptions to this and other > Galaxy lists, please use the interface at: > http://lists.bx.psu.edu/ > > To search Galaxy mailing lists use the unified search at: > http://galaxyproject.org/search/mailinglists/ > ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/ ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
