Thanks for the reply John,
It turns out my problem was with the drama conf file (forgot about that one)
and I'm just posting this reply on the off change google leads someone else to
the solution :)
-bash-4.1$ more /opt/pbs-drmaa/etc/pbs_drmaa.conf
From: John Chilton [mailto:jmchil...@gmail.com]
Sent: Sunday, November 02, 2014 5:20 PM
To: Shrum, Donald C
Subject: Re: [galaxy-dev] job_working / tmp folders
I am not aware of any other way new_file_path is accessed. Is it old jobs that
were queued up prior to the switch? I think job_working_directory might
actually be affected by the settings in your object store configuration. Have
you configured an object store?
In either case - knowing the specific tools to look at that are still
referencing these old files might really help diagnose the problem.
Hope this helps.
On Thu, Oct 30, 2014 at 1:56 PM, Shrum, Donald C <dcsh...@admin.fsu.edu> wrote:
> I changed the values for new_file_path and job_working_directory in my
> config file.
> After restarting galaxy I’m finding some of the tools still reference
> the old path which no longer exists. Do these end up hard coded in
> some place… I haven’t done a find + grep to go looking yet but that
> may be the next step…
> Thanks for any help
> FSU Research Computing Center
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