Hi,
If you have a line in your Apache conf like 
"Listen 80"
change to 
"Listen 8081"



> On 20 Oct 2015, at 21:00, Makis Ladoukakis <makis4e...@hotmail.com> wrote:
> 
> Hello,
> 
> I am sorry but I have really no experience with setting up the Apache web 
> server so I am not really sure how to do that. Can you please help me out 
> with it? My apache configuration file is in /etc/httpd/conf/ directory and 
> there are no directories such as /sites-available/ or /sites-enabled/ (as I 
> would find in an ubuntu installation).
> 
> What I did already (after some advice from the server admin) is open up the 
> 8081 port like that:
> 
> firewall-cmd  --permanent  --add-port=8081/tcp
> 
> firewall-cmd  --reload
> 
> 
> and then I got another error:
> 
>  [cgi:error] [pid 29603] [client 115.230.124.164:4559] script not found or 
> unable to stat: /var/www/cgi-bin/common
> [autoindex:error] [pid 29716] [client 218.76.28.36:4468] AH01276: Cannot 
> serve directory /var/www/html/: No matching DirectoryIndex 
> (index.html,index.php) found, and server-generated directory index forbidden 
> by Options directive
> 
> which I tried to solve by adding welcome.html as a recognizable filename in 
> the apache configuration:
> 
> <IfModule dir_module>
> DirectoryIndex index.html welcome.html
> </IfModule>
> 
> 
> but nothing worked and now the error_log shows the following:
> 
> [Tue Oct 20 13:15:23.719295 2015] [mpm_prefork:notice] [pid 29598] AH00170: 
> caught SIGWINCH, shutting down gracefully
> [Tue Oct 20 13:15:24.810684 2015] [core:notice] [pid 46896] SELinux policy 
> enabled; httpd running as context system_u:system_r:httpd_t:s0
> [Tue Oct 20 13:15:24.811647 2015] [suexec:notice] [pid 46896] AH01232: suEXEC 
> mechanism enabled (wrapper: /usr/sbin/suexec)
> [Tue Oct 20 13:15:24.846399 2015] [so:warn] [pid 46896] AH01574: module 
> wsgi_module is already loaded, skipping
> [Tue Oct 20 13:15:24.847316 2015] [auth_digest:notice] [pid 46896] AH01757: 
> generating secret for digest authentication ...
> [Tue Oct 20 13:15:24.848294 2015] [lbmethod_heartbeat:notice] [pid 46896] 
> AH02282: No slotmem from mod_heartmonitor
> [Tue Oct 20 13:15:24.870033 2015] [mpm_prefork:notice] [pid 46896] AH00163: 
> Apache/2.4.6 (CentOS) PHP/5.4.16 mod_wsgi/3.4 Python/2.7.5 configured -- 
> resuming normal operations
> [Tue Oct 20 13:15:24.870075 2015] [core:notice] [pid 46896] AH00094: Command 
> line: '/usr/sbin/httpd -D FOREGROUND'
> 
> And the webpage that galaxy is supposed to appear is still blank.
> 
> Any ideas?
> 
> Thank you,
> Makis
> 
>  
> 
> Date: Tue, 20 Oct 2015 11:01:44 +1030
> Subject: Re: [galaxy-dev] FW: Galaxy on Centos via Apache - connection refused
> From: jcsanch...@gmail.com
> To: makis4e...@hotmail.com
> CC: galaxy-...@lists.bx.psu.edu
> 
> hi,
> 
> Maybe sounds silly, but have you tried to put the apache configuration in a 
> virtual host within the sites-enable site?
> 
> 
> cheers
> jc
> 
> On Tue, Oct 20, 2015 at 12:36 AM, Makis Ladoukakis <makis4e...@hotmail.com> 
> wrote:
> Forwading to this list too. I am not sure if they are two separate lists.
> 
> Makis
> 
> From: makis4e...@hotmail.com
> To: galaxy-dev@lists.galaxyproject.org
> Date: Mon, 19 Oct 2015 17:04:13 +0300
> Subject: [galaxy-dev] Galaxy on Centos via Apache - connection refused
> 
> 
> Dear all,
> 
> I've been trying to set up a Galaxy instance on my CentOS server but even 
> when I manage to run the simplest configuration correctly I can't seem to get 
> it right on my browser as the connection is refused.
> 
> I have changed the host to 0.0.0.0, the port to 8081 and made the appropriate 
> changes in Apache configuration file:
> 
> RewriteEngine on
> RewriteRule ^/galaxy_test(.*) http://localhost:8081$1 [P]
> RewriteRule ^/galaxy_test$ /galaxy_test/ [R]
> RewriteRule ^/galaxy_test/static/style/(.*) 
> /home/galaxy_test/galaxy/static/june_2007_style/blue/$1 [L]
> RewriteRule ^/galaxy_test/static/scripts/(.*) 
> /home/galaxy_test/galaxy/static/scripts/packed/$1 [L]
> RewriteRule ^/galaxy_test/static/(.*) /home/galaxy_test/galaxy/static/$1 [L]
> RewriteRule ^/galaxy_test/favicon.ico 
> /home/galaxy_test/galaxy/static/favicon.ico [L]
> RewriteRule ^/galaxy_test/robots.txt 
> /home/galaxy_test/galaxy/static/robots.txt [L]
> 
> So when I tried to run it the first time I got the "temporarily out of 
> service" error on my browser and the following error in apache log:
> 
> [Mon Oct 19 05:56:45.308714 2015] [proxy:error] [pid 18505] (13)Permission 
> denied: AH00957: HTTP: attempt to connect to 127.0.0.1:8081 (*) failed
> [Mon Oct 19 05:56:45.308774 2015] [proxy_http:error] [pid 18505] [client 
> 185.25.151.159:39629] AH01114: HTTP: failed to make connection to backend: 
> localhost
> 
> Searching the internet I found the following solution:
> 
> /usr/sbin/setsebool httpd_can_network_connect 1
> /usr/sbin/setsebool -P httpd_can_network_connect 1
> 
> 
> but when I restarted my galaxy my browser would now show just a blank page 
> and the error log of apache was:
> 
> [Mon Oct 19 15:29:09.425120 2015] [proxy:error] [pid 29699] (111)Connection 
> refused: AH00957: HTTP: attempt to connect to 127.0.0.1:8081 (*) failed
> [Mon Oct 19 15:29:09.425167 2015] [proxy_http:error] [pid 29699] [client 
> 147.102.86.121:51865] AH01114: HTTP: failed to make connection to backend: 
> localhost
> 
> 
> Has anyone encountered that?
> 
> Kind regards,
> Makis
> 
> 
> 
> 
> 
> 
> P.S. In case that helps the output of iptables -L is the following:
> Chain INPUT (policy ACCEPT)
> target     prot opt source               destination         
> ACCEPT     all  --  anywhere             anywhere             ctstate 
> RELATED,ESTABLISHED
> ACCEPT     all  --  anywhere             anywhere            
> INPUT_direct  all  --  anywhere             anywhere            
> INPUT_ZONES_SOURCE  all  --  anywhere             anywhere            
> INPUT_ZONES  all  --  anywhere             anywhere            
> ACCEPT     icmp --  anywhere             anywhere            
> REJECT     all  --  anywhere             anywhere             reject-with 
> icmp-host-prohibited
> 
> Chain FORWARD (policy ACCEPT)
> target     prot opt source               destination         
> ACCEPT     all  --  anywhere             anywhere             ctstate 
> RELATED,ESTABLISHED
> ACCEPT     all  --  anywhere             anywhere            
> FORWARD_direct  all  --  anywhere             anywhere            
> FORWARD_IN_ZONES_SOURCE  all  --  anywhere             anywhere            
> FORWARD_IN_ZONES  all  --  anywhere             anywhere            
> FORWARD_OUT_ZONES_SOURCE  all  --  anywhere             anywhere            
> FORWARD_OUT_ZONES  all  --  anywhere             anywhere            
> ACCEPT     icmp --  anywhere             anywhere            
> REJECT     all  --  anywhere             anywhere             reject-with 
> icmp-host-prohibited
> 
> Chain OUTPUT (policy ACCEPT)
> target     prot opt source               destination         
> OUTPUT_direct  all  --  anywhere             anywhere            
> 
> Chain FORWARD_IN_ZONES (1 references)
> target     prot opt source               destination         
> FWDI_public  all  --  anywhere             anywhere            [goto] 
> FWDI_public  all  --  anywhere             anywhere            [goto] 
> 
> Chain FORWARD_IN_ZONES_SOURCE (1 references)
> target     prot opt source               destination         
> 
> Chain FORWARD_OUT_ZONES (1 references)
> target     prot opt source               destination         
> FWDO_public  all  --  anywhere             anywhere            [goto] 
> FWDO_public  all  --  anywhere             anywhere            [goto] 
> 
> Chain FORWARD_OUT_ZONES_SOURCE (1 references)
> target     prot opt source               destination         
> 
> Chain FORWARD_direct (1 references)
> target     prot opt source               destination         
> 
> Chain FWDI_public (2 references)
> target     prot opt source               destination         
> FWDI_public_log  all  --  anywhere             anywhere            
> FWDI_public_deny  all  --  anywhere             anywhere            
> FWDI_public_allow  all  --  anywhere             anywhere            
> 
> Chain FWDI_public_allow (1 references)
> target     prot opt source               destination         
> 
> Chain FWDI_public_deny (1 references)
> target     prot opt source               destination         
> 
> Chain FWDI_public_log (1 references)
> target     prot opt source               destination         
> 
> Chain FWDO_public (2 references)
> target     prot opt source               destination         
> FWDO_public_log  all  --  anywhere             anywhere            
> FWDO_public_deny  all  --  anywhere             anywhere            
> FWDO_public_allow  all  --  anywhere             anywhere            
> 
> Chain FWDO_public_allow (1 references)
> target     prot opt source               destination         
> 
> Chain FWDO_public_deny (1 references)
> target     prot opt source               destination         
> 
> Chain FWDO_public_log (1 references)
> target     prot opt source               destination         
> 
> Chain INPUT_ZONES (1 references)
> target     prot opt source               destination         
> IN_public  all  --  anywhere             anywhere            [goto] 
> IN_public  all  --  anywhere             anywhere            [goto] 
> 
> Chain INPUT_ZONES_SOURCE (1 references)
> target     prot opt source               destination         
> 
> Chain INPUT_direct (1 references)
> target     prot opt source               destination         
> 
> Chain IN_public (2 references)
> target     prot opt source               destination         
> IN_public_log  all  --  anywhere             anywhere            
> IN_public_deny  all  --  anywhere             anywhere            
> IN_public_allow  all  --  anywhere             anywhere            
> 
> Chain IN_public_allow (1 references)
> target     prot opt source               destination         
> ACCEPT     tcp  --  anywhere             anywhere             tcp dpt:http 
> ctstate NEW
> ACCEPT     tcp  --  anywhere             anywhere             tcp dpt:ssh 
> ctstate NEW
> ACCEPT     tcp  --  anywhere             anywhere             tcp dpt:https 
> ctstate NEW
> 
> Chain IN_public_deny (1 references)
> target     prot opt source               destination         
> 
> Chain IN_public_log (1 references)
> target     prot opt source               destination         
> 
> Chain OUTPUT_direct (1 references)
> target     prot opt source               destination         
> 
> 
> 
> 
> 
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