What kind of database backend are you using (postgres, myql, or the
If you are running many jobs - I would definitely encourage using postgres.
On Sun, Mar 13, 2016 at 2:48 PM, Zuzanna K. Filutowska
> Dear All,
> I am running newest version of Galaxy with PBS and I am observing
> strange behaviour: some jobs that were finished on the queue system are
> still shown as running on Galaxy Web interface. Communication with PBS
> server seems to work fine all the time. Nothing interesting seems to be
> in logs despite debug being on:
> sqlalchemy.pool.QueuePool ERROR 2016-03-13 11:36:02,544 Error closing
> Any ideas, what can be a problem?
> Zuzanna K. Filutowska, HPC Systems Administrator
> Poznan Supercomputing and Networking Center
> Institute of Bioorganic Chemistry Polish Academy of Sciences
> Seize the day boys! Make your lifes extraordinary! --John Keating
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