Thanks! The blog post is very helpful.
> ---------- Forwarded message ----------
> From: Peter Briggs <peter.bri...@manchester.ac.uk>
> To: email@example.com
> Date: Wed, 8 Jun 2016 08:25:03 +0100
> Subject: Re: [galaxy-dev] Deploying custom genome in Galaxy for use with
> Hello David
> I don't think it will answer all your questions, however: I wrote up my
> experiences with installing ANNOVAR in Galaxy last year which might be
> useful as a starting point:
> As I recall all the databases we installed were standard ones from
> ANNOVAR. However the above instructions might be useful in at least
> getting started.
> Apologies if I've misunderstood your question and this doesn't help,
> Best wishes
> On 07/06/16 17:48, David Kovalic wrote:
> > All,
> > From my read of the command line docs for ANNOVAR I believe that the
> > program needs so ancillary files for its operation (e.g. GenePred file,
> > transcripts fasta file, etc...).
> > Does anyone have any experience deploying custom genomes in Galaxy for
> > use with ANNOVAR? Specifically what files need to go where in order to
> > enable the Galaxy ANNOVAR front end?
> > Thanks,
> > David
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> Peter Briggs peter.bri...@manchester.ac.uk
> Bioinformatics Core Facility University of Manchester
> B.1083 Michael Smith Bldg Tel: (0161) 2751482
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