Hello Gildas
I think the problem is more that the actual server isn't serving the
packages that are already hosted there.
For example:
$ wget
http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz
...
<time passes>
...
--2016-12-19 10:20:47-- (try:20)
http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz
Connecting to depot.galaxyproject.org
(depot.galaxyproject.org)|128.118.250.14|:80... failed: Connection timed
out.
Giving up.
I tried this from a few different locations last week with the same result.
Best wishes
Peter
On 19/12/16 10:08, Gildas Le Corguillé wrote:
You can propose some updates (ie: URL) in this GitHub repo
: https://github.com/galaxyproject/cargo-port
Cheers
Gildas
-----------------------------------------------------------------
Gildas Le Corguillé - Bioinformatician/Bioanalyste
Plateform ABiMS (Analyses and Bioinformatics for Marine Science)
http://abims.sb-roscoff.fr
Member of the Workflow4Metabolomics project
http://workflow4metabolomics.org <http://workflow4metabolomics.org/>
Station Biologique de Roscoff - UPMC/CNRS - FR2424
Place Georges Teissier 29680 Roscoff FRANCE
tel: +33 2 98 29 23 81
------------------------------------------------------------------
Le 19 déc. 2016 à 10:42, Peter Briggs <[email protected]
<mailto:[email protected]>> a écrit :
Hello James
I think this might be a general problem with depot.galaxyproject.org
<http://depot.galaxyproject.org> serving packages, as I've been
experiencing similar problems since Friday - attempts to fetch e.g.
http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz
also fail with timeouts.
I guess it needs someone from the the Galaxy project to take a look,
Best wishes
Peter
On 18/12/16 20:25, James Mullan wrote:
Hello,*
*
* * I am trying to install packages with dependencies from
Galaxy Main tool shed.
This worked Thursday and since Friday it no longer works for me.
It seems this url is no longer reachable. Examples of what I see in the
log during download are shown below.
Any help would be much appreciated.
package_bowtie_0_12_7
Error downloading from URL
http://depot.galaxyproject.org/package/linux/x86_64/bowtie/bowtie-0.12.7-linux-x86_64.tgz
package_samtools_0_1_19
Exception: Error downloading from URL
https://depot.galaxyproject.org/software/samtools/samtools_0.1.19_src_all.tar.bz2*
*
Regards
James
J P Mullan
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--
Peter Briggs [email protected]
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482
___________________________________________________________
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--
Peter Briggs [email protected]
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482
___________________________________________________________
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