Thanks for the update Nate, glad you were able to fix it!
Best wishes
Peter

--
Peter Briggs peter.bri...@manchester.ac.uk
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482

________________________________
From: Nate Coraor [n...@bx.psu.edu]
Sent: Monday, December 19, 2016 5:08 PM
To: Peter Briggs
Cc: Gildas Le Corguillé; James Mullan; Galaxy Dev List
Subject: Re: [galaxy-dev] Installation of packages failing

Hi Peter, Gildas,

This was due to a power supply failure which we've fixed this morning, so this 
should all be working now.

Thanks,
--nate

On Mon, Dec 19, 2016 at 5:46 AM, Peter Briggs 
<peter.bri...@manchester.ac.uk<mailto:peter.bri...@manchester.ac.uk>> wrote:
Hello Gildas

I think the problem is more that the actual server isn't serving the packages 
that are already hosted there.

For example:

$ wget 
http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz
...
<time passes>
...
--2016-12-19 10:20:47--  (try:20) 
http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz
Connecting to depot.galaxyproject.org<http://depot.galaxyproject.org> 
(depot.galaxyproject.org<http://depot.galaxyproject.org>)|128.118.250.14|:80... 
failed: Connection timed out.
Giving up.

I tried this from a few different locations last week with the same result.

Best wishes

Peter

On 19/12/16 10:08, Gildas Le Corguillé wrote:
You can propose some updates (ie: URL) in this GitHub repo
: https://github.com/galaxyproject/cargo-port

Cheers

Gildas

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Le 19 déc. 2016 à 10:42, Peter Briggs 
<peter.bri...@manchester.ac.uk<mailto:peter.bri...@manchester.ac.uk>
<mailto:peter.bri...@manchester.ac.uk<mailto:peter.bri...@manchester.ac.uk>>> a 
écrit :

Hello James

I think this might be a general problem with 
depot.galaxyproject.org<http://depot.galaxyproject.org>
<http://depot.galaxyproject.org> serving packages, as I've been

experiencing similar problems since Friday - attempts to fetch e.g.

http://depot.galaxyproject.org/package/source/galaxy_sequence_utils/galaxy_sequence_utils-1.0.1-st.tgz

also fail with timeouts.

I guess it needs someone from the the Galaxy project to take a look,

Best wishes

Peter

On 18/12/16 20:25, James Mullan wrote:
Hello,*
*
* *          I am trying to install packages with dependencies from
Galaxy Main tool shed.
This worked Thursday and since Friday it no longer works for me.
It seems this url is no longer reachable. Examples of what I see in the
log during download are shown below.

Any help would be much appreciated.

package_bowtie_0_12_7
Error downloading from URL
http://depot.galaxyproject.org/package/linux/x86_64/bowtie/bowtie-0.12.7-linux-x86_64.tgz

package_samtools_0_1_19
Exception: Error downloading from URL
https://depot.galaxyproject.org/software/samtools/samtools_0.1.19_src_all.tar.bz2*
*

Regards
​James

J P Mullan


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--
Peter Briggs peter.bri...@manchester.ac.uk<mailto:peter.bri...@manchester.ac.uk>
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482
___________________________________________________________
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--
Peter Briggs peter.bri...@manchester.ac.uk<mailto:peter.bri...@manchester.ac.uk>
Bioinformatics Core Facility University of Manchester
B.1083 Michael Smith Bldg Tel: (0161) 2751482
___________________________________________________________
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in your mail client.  To manage your subscriptions to this
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 https://lists.galaxyproject.org/

To search Galaxy mailing lists use the unified search at:
 http://galaxyproject.org/search/mailinglists/

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