That's a shame - I don't see anything in the log either at first reading - it was hoping to see problems with missing datatypes or sniffers, which might explain this.
Sorry, I am out of ideas. Peter On Fri, Sep 22, 2017 at 2:41 PM, Pavel Fibich <pavel.fib...@prf.jcu.cz> wrote: > Hi Hans-Rudolf and Peter, > > thank you for replies. I tried both suggestions, but no luck. > > I made empty database, let galaxy run from it. Than, uploading fasta file > again finished in the format 'data', not recognized again. > > Also, I did not find anything interesting in the startup logs ( logs are > here: https://repeatexplorer-elixir.cerit-sc.cz/galstart2.log ), there are > just fine information about datatypes, eg. for fasta: > > galaxy.datatypes.registry DEBUG 2017-09-22 15:11:52,810 Retrieved datatype > module galaxy.datatypes.sequence:Fasta from the datatype registry. > ... > galaxy.datatypes.registry DEBUG 2017-09-22 15:11:52,929 Loaded sniffer for > datatype 'galaxy.datatypes.sequence:Fasta' > > I have only config/datatypes_conf.xml.sample, so I expect that it is > default. > > If you have any other ideas, I will be glad for them. > > Best, Pavel ___________________________________________________________ Please keep all replies on the list by using "reply all" in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: https://lists.galaxyproject.org/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/
