On Mon, Mar 21, 2011 at 1:42 PM, David K Crossman <dkcro...@uab.edu> wrote:
> Hello!
>
>
>
>                 I am fairly new to using Galaxy and have a question about
> the FASTQ Groomer feature.  I have 4 RNA-Seq raw data files that were just
> recently generated from Illumina’s NGS instruments.

Very recently? If they are already using Illumina's CASAVA v1.8 pipeline
then the FASTQ files will already be in the Sanger FASTQ format:
http://seqanswers.com/forums/showthread.php?t=8895

Peter

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