And sure enough I'm not. Thanks for the reply.
On Jul 27, 2011, at 1:02 PM, Kanwei Li wrote:
> Hi Todd,
> Are you using the blastn wrapper from the galaxy-central repository?
> On Tue, Jul 26, 2011 at 12:40 PM, Todd Yilk <ty...@lanl.gov> wrote:
> Hello all,
> I'm using the blastn tool and Galaxy is generating this command (pasting from
> the log file):
> command is: perl /opt/galaxy/dev/galaxy_dist_dev_umma/tools/blast/psub -l
> galaxy_normal.c --fasta
> blastn -query
> -db "/house/blast_db/ncbi/nt/2011-01-11/nt" -task blastn -evalue 0.001 -out
> -outfmt "6"
> It's failing in Galaxy and I get a "script psub: No such file" kind of error
> running it at the command line ... I'm assuming psub here isn't the Unix
> command. According to find, my Galaxy installation doesn't have a
> galaxy_normal.c file either.
> Is there something I didn't install?
> - Todd Yilk
> Software Developer
> Los Alamos National Laboratory
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