I have 3 groups of accepted hits, each group has 3 replicates. When I add 3 groups with corresponding replicates, the cuffdiff output only gave 2 groups comparison of differential expression, Please help me here
------ Hongyan An, Ph.D. Research Associate Genomics Core of Yale Stem Cell Center Yale University School of Medicine 10 Amistad Street Room 203 New Haven, CT 06520 phone: (203)-737-6203 Fax: (203) 785-4305 hongyan...@yale.edu<mailto:hongyan...@yale.edu> ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
