Dear all,

We are setting up a galaxy istance on our server (HPC Cluster with torque
and PBS) for internal use.
Our problem is that we manage only NGS data (SOLiD and Illumina Data) that
are already stored on the server. When we connect to galaxy with our clients
we are not able to browse the server file system. Having the possibility to
browse the server filesystem would be the best solution for us!!
We have look for this funtion but it seems it is not possible...

Now, we tried to set up the user directory but adding new file and
re-uploading the dir we found duplicated files (it seems that galaxy
re-upload every time all the files ignoring if some are already present.
This method is OK for us but how can we avoid the file duplications ?

In a presentation found on web (blankenberg_pittsburg_2001), we saw that
there is the possibility to automatically upload the sequenced reads on
Galaxy (and let them available to all our user). Where can we find
information for doing this ?

All the best


Alessandro Albiero
Bioinformatics Lab
CRIBI-Padua University
Viale G. Colombo, 3
35121 Padova-Italy
Phone. +39. 049 827-6165
Fax.   +39. 049 827-6159
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