Hello Clare,

Perhaps the loaded pileup datasets are not assigned to the "pileup" datatype? Click on the pencil icon in the right upper corner of the loaded pileup dataset, then use "Edit Attributes -> Change data type".


Hopefully this helps,

Best,

Jen
Galaxy team


On 10/29/11 4:10 PM, James Nelson wrote:
Hi, I'm trying to use the SAM/Filter pileup analysis on some pileup output 
files I've uploaded. But when I click the analysis link, these output files 
don't appear in the Select dataset dropdown menu; instead only one file, the 
output from FASTQ Summary Statistics which is obviously not pileup output, is 
shown.

Thanks
Clare Nelson
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