Can you clarify what is different between the Zv9 version of the UCSC Zebrafish and the Zv9 version of the Ensembl Zebrafish genome ? They both appear to have the identical number of 1,412,464,843 nucleotides.
--Hiram ----- Original Message ----- From: "Sheena Scroggins" <sheena.scrogg...@pnnl.gov> To: galaxy-u...@bx.psu.edu Sent: Friday, November 4, 2011 2:50:13 PM Subject: [galaxy-user] Uploading Genome from Ensembl How do I upload the Zebrafish genome from Ensembl to my user history in Galaxy? I’m trying to map my RNA-Seq data using TopHat and need to map it to the Ensembl version of ZFv9, but Galaxy only has the UCSC version built in. The Ensembl version is slightly different. Thanks, Sheena ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
