Hello Ateeq,
Custom reference genomes are loaded in FASTA format. Help for preparing
the data is in our wiki:
http://wiki.g2.bx.psu.edu/Support#Custom_reference_genome
http://wiki.g2.bx.psu.edu/Learn/CustomGenomes
Best,
Jen
Galaxy team
On 6/14/12 9:15 AM, Ateequr Rehman wrote:
Dear All
I am analysing bacterial RNA seq (illumina). as my reference genome is
not in galaxy. so i need to downlaoded the reference genome from NCBI
and upload to my history
Should i use reference genome with gene features or single fasta
file with out any annotation information. even after download should i
need to modify or it should be used as it is.
Thanks in advance
Ateeq
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