Thanks, but I'm confused. How will the cluster jobs galaxy submits know to use the virtual env?
Or since all jobs are submitted as the galaxy user it will have the correct one? -Greg On Tue, Nov 6, 2012 at 3:12 PM, Carlos Borroto <[email protected]> wrote: > On Tue, Nov 6, 2012 at 2:27 PM, greg <[email protected]> wrote: >> Could anyone provide me with some basic directions on how to set it up >> with virtualenv? I've never used it before. >> > > I do this by adding this to the ~/.bashrc file of the user running > galaxy( in galaxy.fedora-init: RUN_AS="galaxy") > source $HOME/env/bin/activate > > Hope it helps, > Carlos ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
