I am using the Galaxy web tool to analyze ChIP-seq data. By applying MACS
algorithm, the Galaxy browser generated bed and wig files. Within the
Galaxy browser, the bed file has a link to the UCSC Genome browser whereas
the wig file has no link to the UCSC browser. I wonder which file is best
to visualize the peaks in the UCSC Genome browser and how? Any experience
or just thoughts?
Thank you very much in advance!
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
To manage your subscriptions to this and other Galaxy lists,
please use the interface at: