Messages by Date
-
2013/03/13
[galaxy-user] Cuffdiff statistical calculations are inconsistent?
Jenna Smith
-
2013/03/12
[galaxy-user] ftp upload problem
Raaben, Matthijs
-
2013/03/12
[galaxy-user] ftp upload problem
Raaben, Matthijs
-
2013/03/11
Re: [galaxy-user] Web Galaxy server and load
Jennifer Jackson
-
2013/03/11
[galaxy-user] Amazon EC2: An error occurred running this job: Job output not returned from cluster
Brian Lin
-
2013/03/09
[galaxy-user] convert to BigWig
Kristin Denise Kernohan
-
2013/03/08
Re: [galaxy-user] [galaxy-dev] not enough memory space on my galaxy session
Jeremy Goecks
-
2013/03/08
[galaxy-user] Reminder: Galaxy Main & Test Server downtime for hardware relocation Thursday, March 14, 2013
Jennifer Jackson
-
2013/03/08
Re: [galaxy-user] How should I include biological replicates in cufflink/cuffdiff?
Jeremy Goecks
-
2013/03/08
[galaxy-user] Web Galaxy server and load
Ann Holtz-Morris, M.S.
-
2013/03/07
Re: [galaxy-user] Why don't we get FPKMs from this gene?
Daniel Sher
-
2013/03/07
Re: [galaxy-user] wrong disk usage figure reported on galaxy main
Nate Coraor
-
2013/03/07
[galaxy-user] Galaxy Main & Test Server downtime for hardware relocation Thursday, March 14, 2013
Jennifer Jackson
-
2013/03/07
[galaxy-user] wrong disk usage figure reported on galaxy main
pbourbon
-
2013/03/05
Re: [galaxy-user] Local galaxy install vs cloudman
Enis Afgan
-
2013/03/05
[galaxy-user] Local galaxy install vs cloudman
James Vincent
-
2013/03/05
Re: [galaxy-user] What is the quality score type for the Solid datasets downloaded from SRA of NCBI?
Jennifer Jackson
-
2013/03/05
[galaxy-user] What is the quality score type for the Solid datasets downloaded from SRA of NCBI?
Gene Genome
-
2013/03/04
Re: [galaxy-user] Count reads mapping to introns, extragenic regions
Jennifer Jackson
-
2013/03/04
Re: [galaxy-user] How should I include biological replicates in cufflink/cuffdiff?
Qian Dong
-
2013/03/04
Re: [galaxy-user] Using BWA to map without any mismathces
Jennifer Jackson
-
2013/03/04
Re: [galaxy-user] Filter Pileup in SAM tools
Anton Nekrutenko
-
2013/03/04
Re: [galaxy-user] Why don't we get FPKMs from this gene?
Daniel Sher
-
2013/03/04
[galaxy-user] Setting up galaxy local server
Anusha Nagari
-
2013/03/04
Re: [galaxy-user] Error / Nebula - Chipmunk
Sarah Maman
-
2013/03/03
Re: [galaxy-user] How should I include biological replicates in cufflink/cuffdiff?
Jeremy Goecks
-
2013/03/03
[galaxy-user] Using BWA to map without any mismathces
Daniel Sher
-
2013/03/01
[galaxy-user] How should I include biological replicates in cufflink/cuffdiff?
Qian Dong
-
2013/03/01
[galaxy-user] Support Question
Thomas Muench
-
2013/02/28
[galaxy-user] March 2013 Galaxy Update
Dave Clements
-
2013/02/26
Re: [galaxy-user] Viral metagenomics
Peter Cock
-
2013/02/26
Re: [galaxy-user] "join,subtract and group" tools can't be used
Jennifer Jackson
-
2013/02/26
Re: [galaxy-user] "join,subtract and group" tools can't be used
Jennifer Jackson
-
2013/02/26
[galaxy-user] Viral metagenomics
Mohammad Mohiuddin
-
2013/02/26
[galaxy-user] "join,subtract and group" tools can't be used
Lu, Mengmeng
-
2013/02/25
Re: [galaxy-user] How to create a tool from a script that loads additional source code files?
Samuel Lampa
-
2013/02/25
Re: [galaxy-user] How to create a tool from a script that loads additional source code files?
Peter Cock
-
2013/02/25
[galaxy-user] How to create a tool from a script that loads additional source code files?
Samuel Lampa
-
2013/02/24
[galaxy-user] 2013 Galaxy Community Conference (GCC2013) Registration and Abstract Submission are Now Open
Dave Clements
-
2013/02/23
Re: [galaxy-user] Why don't we get FPKMs from this gene?
Jennifer Jackson
-
2013/02/22
[galaxy-user] Filter Pileup in SAM tools
Andrew South
-
2013/02/21
Re: [galaxy-user] Installing Galaxy on ARM Architecture
Shun Liang
-
2013/02/21
Re: [galaxy-user] Installing Galaxy on ARM Architecture
James Taylor
-
2013/02/21
[galaxy-user] Installing Galaxy on ARM Architecture
Shun Liang
-
2013/02/21
Re: [galaxy-user] [galaxy-dev] History not updating for multiple instances of Galaxy
Peter Cock
-
2013/02/20
Re: [galaxy-user] History not updating for multiple instances of Galaxy
Neil.Burdett
-
2013/02/20
[galaxy-user] History not updating for multiple instances of Galaxy
Neil.Burdett
-
2013/02/20
Re: [galaxy-user] Problem Loading History Pane
Jennifer Jackson
-
2013/02/20
[galaxy-user] Post Galaxy-ChIP-seq analysis: UCSC Genome browser can't read the wig file
Bodour Al-Khamees
-
2013/02/20
Re: [galaxy-user] Post Galaxy-ChIP-seq analysis: UCSC Genome browser can't read the wig file
Jennifer Jackson
-
2013/02/20
Re: [galaxy-user] Welcome to the "galaxy-user" mailing list (Digest mode)
Dannon Baker
-
2013/02/20
Re: [galaxy-user] Welcome to the "galaxy-user" mailing list (Digest mode)
Bodour Al-Khamees
-
2013/02/20
[galaxy-user] Post Galaxy-ChIP-seq analysis: UCSC Genome browser can't read the wig file
Bodour Al-Khamees
-
2013/02/19
Re: [galaxy-user] sicer dose not support chicken genome
Jennifer Jackson
-
2013/02/19
Re: [galaxy-user] mitochondrial transcripts
Jennifer Jackson
-
2013/02/19
Re: [galaxy-user] mitochondrial transcripts
Brown, Tim
-
2013/02/19
[galaxy-user] error in .vcf .bcf files from freeBayes and mPileup
stefano cardinale
-
2013/02/19
Re: [galaxy-user] mitochondrial transcripts
Jennifer Jackson
-
2013/02/19
Re: [galaxy-user] Uploading large archive histories
Jennifer Jackson
-
2013/02/19
[galaxy-user] mitochondrial transcripts
Brown, Tim
-
2013/02/18
Re: [galaxy-user] replicates in cuffdiff output
Jeremy Goecks
-
2013/02/18
Re: [galaxy-user] Uploading large archive histories
Jesse Erdmann
-
2013/02/18
[galaxy-user] replicates in cuffdiff output
Johanna Sandgren
-
2013/02/17
[galaxy-user] sicer dose not support chicken genome
Chen, Jingchen
-
2013/02/16
Re: [galaxy-user] Problem Loading History Pane
Lizex Husselmann
-
2013/02/15
Re: [galaxy-user] Problem Loading History Pane
Nate Coraor
-
2013/02/15
[galaxy-user] Problem Loading History Pane
Mike Dufault
-
2013/02/14
Re: [galaxy-user] Rscript not found when running shell script in Galaxy
Bossers, Alex
-
2013/02/14
Re: [galaxy-user] Why don't we get FPKMs from this gene?
Noa Sher
-
2013/02/13
Re: [galaxy-user] galaxy-user submission
Jennifer Jackson
-
2013/02/13
[galaxy-user] galaxy-user submission
Oya Uyguner
-
2013/02/13
Re: [galaxy-user] Problem
Jennifer Jackson
-
2013/02/13
[galaxy-user] Fwd: Installing new tools from the tool shed
David Joly
-
2013/02/13
[galaxy-user] Installing new tools from the tool shed
David Joly
-
2013/02/13
[galaxy-user] Problem
Christopher O'Toole
-
2013/02/13
Re: [galaxy-user] Problems with large gzipped fasta files
Nate Coraor
-
2013/02/13
Re: [galaxy-user] Problems with large gzipped fasta files
Jim Robinson
-
2013/02/13
Re: [galaxy-user] Reference Genome in Lastz
Jennifer Jackson
-
2013/02/13
Re: [galaxy-user] Galaxy on one computer not showing latest runs in history
Dannon Baker
-
2013/02/13
[galaxy-user] Galaxy on one computer not showing latest runs in history
Dikla Aharonovich
-
2013/02/13
[galaxy-user] Reference Genome in Lastz
Murphy, Caitlin N
-
2013/02/13
Re: [galaxy-user] Problems with large gzipped fasta files
Nate Coraor
-
2013/02/12
Re: [galaxy-user] hg19 reference gnome for Tophat2
Sachit Adhikari
-
2013/02/12
[galaxy-user] hg19 reference gnome for Tophat2
Sachit Adhikari
-
2013/02/12
Re: [galaxy-user] cufflinks output for cummeRbund
Jeremy Goecks
-
2013/02/12
Re: [galaxy-user] Galaxy Join takes too long?
Milad Bastami
-
2013/02/12
Re: [galaxy-user] Galaxy Join takes too long?
Jennifer Jackson
-
2013/02/12
[galaxy-user] cufflinks output for cummeRbund
Mike Shamblott
-
2013/02/12
Re: [galaxy-user] Rscript not found when running shell script in Galaxy
Carlos Borroto
-
2013/02/12
[galaxy-user] Galaxy Join takes too long?
Milad Bastami
-
2013/02/12
[galaxy-user] Rscript not found when running shell script in Galaxy
Makis Ladoukakis
-
2013/02/09
Re: [galaxy-user] Discrepancy between Intersect and Join
Aaron Quinlan
-
2013/02/08
[galaxy-user] Galaxy February 8, 2013 Distribution & News Brief
Jennifer Jackson
-
2013/02/08
Re: [galaxy-user] Discrepancy between Intersect and Join
Aaron Quinlan
-
2013/02/08
Re: [galaxy-user] Discrepancy between Intersect and Join
Daniel Blankenberg
-
2013/02/08
Re: [galaxy-user] Discrepancy between Intersect and Join
Aaron Quinlan
-
2013/02/08
Re: [galaxy-user] Discrepancy between Intersect and Join
Daniel Blankenberg
-
2013/02/08
Re: [galaxy-user] Discrepancy between Intersect and Join
Aaron Quinlan
-
2013/02/08
Re: [galaxy-user] Error / Nebula and RepeatMasker
Sarah Maman
-
2013/02/08
[galaxy-user] Discrepancy between Intersect and Join
Aaron Quinlan
-
2013/02/08
Re: [galaxy-user] Why SGE needed for galaxy ?
Zeeshan Ali Shah
-
2013/02/07
Re: [galaxy-user] Why SGE needed for galaxy ?
Enis Afgan
-
2013/02/07
[galaxy-user] Why SGE needed for galaxy ?
Zeeshan Ali Shah
-
2013/02/05
Re: [galaxy-user] Problems with large gzipped fasta files
Jennifer Jackson
-
2013/02/05
Re: [galaxy-user] Error / Nebula and RepeatMasker
alermine
-
2013/02/05
Re: [galaxy-user] Error / Nebula and RepeatMasker
Sarah Maman
-
2013/02/05
[galaxy-user] Problems with large gzipped fasta files
Jim Robinson
-
2013/02/04
Re: [galaxy-user] Error / Nebula and RepeatMasker
alermine
-
2013/02/04
Re: [galaxy-user] Galaxy Help
Jennifer Jackson
-
2013/02/03
Re: [galaxy-user] Galaxy Help
Jennifer Jackson
-
2013/02/03
[galaxy-user] Galaxy Help
John Phillips
-
2013/02/01
Re: [galaxy-user] Fwd: Converting files to gd_snp format
Cathy Riemer
-
2013/02/01
Re: [galaxy-user] can't download big files
Allan Sun
-
2013/02/01
Re: [galaxy-user] Error using Trackster
Kilaru, Varun
-
2013/02/01
Re: [galaxy-user] Error using Trackster
James Taylor
-
2013/02/01
Re: [galaxy-user] Error using Trackster
Kilaru, Varun
-
2013/02/01
Re: [galaxy-user] Error using Trackster
James Taylor
-
2013/02/01
[galaxy-user] Error using Trackster
Kilaru, Varun
-
2013/02/01
[galaxy-user] Error using trackster
Kilaru, Varun
-
2013/02/01
[galaxy-user] February 2013 Galaxy Update
Dave Clements
-
2013/02/01
Re: [galaxy-user] error running cufflinks
Jennifer Jackson
-
2013/02/01
Re: [galaxy-user] error message running Cufflinks on local galaxy
Jennifer Jackson
-
2013/02/01
[galaxy-user] error message running Cufflinks on local galaxy
Davide Degli Esposti
-
2013/02/01
Re: [galaxy-user] gather results from multiple histories
Dannon Baker
-
2013/02/01
[galaxy-user] gather results from multiple histories
mark.rose
-
2013/02/01
[galaxy-user] gather results from multiple histories
mark.rose
-
2013/02/01
Re: [galaxy-user] Error / Nebula and RepeatMasker
Sarah Maman
-
2013/02/01
[galaxy-user] error running cufflinks
Davide Degli Esposti
-
2013/01/31
Re: [galaxy-user] [galaxy-dev] extract DNA sequences
Jeremy Goecks
-
2013/01/31
Re: [galaxy-user] Error / Nebula and RepeatMasker
Björn Grüning
-
2013/01/31
Re: [galaxy-user] does Galaxy have a tool for converting .sra files to fastq files?
Anton Nekrutenko
-
2013/01/31
Re: [galaxy-user] does Galaxy have a tool for converting .sra files to fastq files?
Björn Grüning
-
2013/01/31
[galaxy-user] Error / Nebula and RepeatMasker
Sarah Maman
-
2013/01/31
[galaxy-user] does Galaxy have a tool for converting .sra files to fastq files?
Elwood Linney
-
2013/01/31
Re: [galaxy-user] running time of Cufflinks on main Galaxy
Jennifer Jackson
-
2013/01/31
[galaxy-user] running time of Cufflinks on main Galaxy
Davide Degli Esposti
-
2013/01/30
Re: [galaxy-user] can't download big files
Jennifer Jackson
-
2013/01/29
[galaxy-user] Converting files to gd_snp format
Sheehan, Michael - (michaelsheehan)
-
2013/01/29
Re: [galaxy-user] Mapping miRNA data
Jennifer Jackson
-
2013/01/29
Re: [galaxy-user] How to determine differentially expressed genes using Galaxy?
Jennifer Jackson
-
2013/01/29
Re: [galaxy-user] reference annotation for whole transcriptome RNA-Seq
Jennifer Jackson
-
2013/01/29
[galaxy-user] How to determine differentially expressed genes using Galaxy?
Ben Ben
-
2013/01/29
[galaxy-user] reference annotation for whole transcriptome RNA-Seq
Davide Degli Esposti
-
2013/01/29
[galaxy-user] Mapping miRNA data
Mark Lindsay
-
2013/01/28
[galaxy-user] How to run DESeq? Please Help.
Ben Ben
-
2013/01/27
Re: [galaxy-user] Moving history datasets to libraries
Ted Goldstein
-
2013/01/27
Re: [galaxy-user] Moving history datasets to libraries
Jeremy Goecks
-
2013/01/27
[galaxy-user] Moving history datasets to libraries
Ted Goldstein
-
2013/01/25
Re: [galaxy-user] Problem Joining Two Datasets
Jennifer Jackson
-
2013/01/24
[galaxy-user] Problem Joining Two Datasets
Kim Spradling
-
2013/01/24
[galaxy-user] can't download big files
Allan Sun
-
2013/01/24
Re: [galaxy-user] bed file error
Jennifer Hillman-Jackson
-
2013/01/24
Re: [galaxy-user] bwa and bowtie not working
Jennifer Hillman-Jackson
-
2013/01/24
[galaxy-user] bwa and bowtie not working
naveed ahmed
-
2013/01/24
[galaxy-user] bed file error
SCHEIN ALEKS
-
2013/01/23
Re: [galaxy-user] Search software on public Galaxy servers
Jennifer Hillman-Jackson
-
2013/01/23
Re: [galaxy-user] Runtime data?
Jennifer Hillman-Jackson
-
2013/01/23
Re: [galaxy-user] long waiting time for Bowtie jobs?
Jennifer Jackson
-
2013/01/22
Re: [galaxy-user] Problem with BWA?
Jennifer Jackson
-
2013/01/19
[galaxy-user] Problem with BWA?
Mike Dufault
-
2013/01/18
Re: [galaxy-user] Upload files not working?
Dave Clements
-
2013/01/18
Re: [galaxy-user] "spot" EC2 instances for Galaxy?
Dave Clements
-
2013/01/18
Re: [galaxy-user] [galaxy-dev] Workflows
Dannon Baker
-
2013/01/18
[galaxy-user] Login problems
Jennifer Jackson
-
2013/01/18
[galaxy-user] long waiting time for Bowtie jobs?
Suzie Hight
-
2013/01/18
Re: [galaxy-user] [galaxy-dev] Workflows
Geert Vandeweyer
-
2013/01/18
[galaxy-user] Upload files not working?
Daniel Sher
-
2013/01/18
[galaxy-user] "spot" EC2 instances for Galaxy?
Andrew Norman
-
2013/01/16
Re: [galaxy-user] Tophat mapping and Cufflinks output issues
Jeremy Goecks
-
2013/01/16
Re: [galaxy-user] [galaxy-dev] Workflows
James Taylor
-
2013/01/15
[galaxy-user] Tophat mapping and Cufflinks output issues
Jim Cohen
-
2013/01/15
[galaxy-user] Workflows
Neil.Burdett
-
2013/01/15
[galaxy-user] Runtime data?
Joshua Orvis
-
2013/01/14
Re: [galaxy-user] identify different number of differential expressed genes using ensemble or reseq GTF
Wei Liao
-
2013/01/13
Re: [galaxy-user] converting solid files
Enis Afgan
-
2013/01/13
[galaxy-user] Uploading files to history via API
Neil.Burdett
-
2013/01/11
[galaxy-user] Galaxy January 11, 2013 Distribution & News Brief
Jennifer Jackson
-
2013/01/11
Re: [galaxy-user] [External] Re: macs error for chipseq data
Sun, Wenping [USA]
-
2013/01/11
Re: [galaxy-user] macs error for chipseq data
Jennifer Jackson
-
2013/01/10
[galaxy-user] where to submit galaxy error messgae
Jennifer Jackson
-
2013/01/10
[galaxy-user] macs error for chipseq data
Sun, Wenping [USA]
-
2013/01/10
Re: [galaxy-user] BWA and FASTQ Joiner issues
Jennifer Jackson
-
2013/01/10
[galaxy-user] BWA and FASTQ Joiner issues
Hilde Stawski
-
2013/01/09
Re: [galaxy-user] Download data using FTP-access?
Jennifer Hillman-Jackson
-
2013/01/09
Re: [galaxy-user] Remove "unpaired" reads from quality-filtered pared-end fastq files.
Jennifer Hillman-Jackson
-
2013/01/09
Re: [galaxy-user] joining two FASTq files with overlap reads
Jennifer Hillman-Jackson
-
2013/01/08
[galaxy-user] Fwd: joining two FASTq files with overlap reads
shamsher jagat
-
2013/01/08
Re: [galaxy-user] Remove "unpaired" reads from quality-filtered pared-end fastq files.
Carlos Borroto
-
2013/01/08
[galaxy-user] Search software on public Galaxy servers
Bernardo Bello
-
2013/01/08
Re: [galaxy-user] Download data using FTP-access?
Jennifer Hillman-Jackson
-
2013/01/08
Re: [galaxy-user] identify different number of differential expressed genes using ensemble or reseq GTF
Loraine, Ann
-
2013/01/08
Re: [galaxy-user] [Ticket#2013010710000031] Installation de ChipMunk sur Genotoul
alermine
-
2013/01/08
Re: [galaxy-user] nebula suite / _chiphorde.log not found
alermine
-
2013/01/08
Re: [galaxy-user] Trackster custom builds wrong
Jeremy Goecks
-
2013/01/08
[galaxy-user] Download data using FTP-access?
Karen Margrethe Jessen
-
2013/01/08
Re: [galaxy-user] [Ticket#2013010710000031] Installation de ChipMunk sur Genotoul
Sarah Maman
-
2013/01/08
Re: [galaxy-user] [Ticket#2013010710000031] Installation de ChipMunk sur Genotoul
Sarah Maman
-
2013/01/07
[galaxy-user] Remove "unpaired" reads from quality-filtered pared-end fastq files.
柴田 弘紀
-
2013/01/07
Re: [galaxy-user] identify different number of differential expressed genes using ensemble or reseq GTF
Jennifer Hillman-Jackson
-
2013/01/07
Re: [galaxy-user] gene names from cuffdiff data
Jennifer Hillman-Jackson