I'm trying to get an instance launched and I'm not seeing an instance launch. When I start an ami directly : (ami-da58aab3) it never answers when I try and browser to it via the web (nor does it respond when I do curl localhost)
When I use cloud launch, I can browse to it on the web but on the console it never shows galaxy or postgres as starting (when I try and start postgres it says Cannot find Postgres service – same with starting Galaxy) When I look at the cloud man log – I can see a couple of what appear to be errors in it : [INFO] sge:122 2013-06-25 22:15:08,979: Successfully setup SGE; configuring SGE [DEBUG] sge:123 2013-06-25 22:15:08,979: Adding parallel environments [DEBUG] misc:577 2013-06-25 22:15:08,993: 'cd /opt/sge; ./bin/lx24-amd64/qconf -Ap /tmp/SMP_PE' command OK [DEBUG] misc:577 2013-06-25 22:15:09,006: 'cd /opt/sge; ./bin/lx24-amd64/qconf -Ap /tmp/MPI_PE' command OK [DEBUG] sge:130 2013-06-25 22:15:09,006: Creating queue 'all.q' [DEBUG] sge:135 2013-06-25 22:15:09,006: Created SGE all.q template as file '/opt/sge/all.q.conf' [DEBUG] misc:577 2013-06-25 22:15:09,021: Successfully modified all.q [DEBUG] sge:137 2013-06-25 22:15:09,021: Configuring users' SGE profiles [DEBUG] master:1676 2013-06-25 22:15:09,022: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:09,022: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] misc:113 2013-06-25 22:15:10,054: Checking if bucket 'cm-81a2ec9d11e15570ea7136a31533170e' exists... it does not. [DEBUG] misc:124 2013-06-25 22:15:10,222: Created bucket 'cm-81a2ec9d11e15570ea7136a31533170e'. [INFO] misc:455 2013-06-25 22:15:10,637: Saved file 'persistent_data.yaml' to bucket 'cm-81a2ec9d11e15570ea7136a31533170e' [DEBUG] master:1601 2013-06-25 22:15:10,666: Saving current instance boot script (/tmp/cm/cm_boot.py) to cluster bucket 'cm-81a2ec9d11e15570ea7136a31533170e' as 'cm_boot.py' [INFO] misc:455 2013-06-25 22:15:10,713: Saved file 'cm_boot.py' to bucket 'cm-81a2ec9d11e15570ea7136a31533170e' [DEBUG] master:1605 2013-06-25 22:15:10,740: Saving CloudMan source (/mnt/cm/cm.tar.gz) to cluster bucket 'cm-81a2ec9d11e15570ea7136a31533170e' as 'cm.tar.gz' [INFO] misc:455 2013-06-25 22:15:11,120: Saved file 'cm.tar.gz' to bucket 'cm-81a2ec9d11e15570ea7136a31533170e' [DEBUG] misc:527 2013-06-25 22:15:11,120: Setting metadata 'revision' for file 'cm.tar.gz' in bucket 'cm-81a2ec9d11e15570ea7136a31533170e' [DEBUG] master:1619 2013-06-25 22:15:11,314: Saving '/mnt/cm/bz_test.clusterName' file to cluster bucket 'cm-81a2ec9d11e15570ea7136a31533170e' as 'bz_test.clusterName' [INFO] misc:455 2013-06-25 22:15:11,347: Saved file 'bz_test.clusterName' to bucket 'cm-81a2ec9d11e15570ea7136a31533170e' [DEBUG] sge:405 2013-06-25 22:15:15,747: qstat: ['[email protected] BIP 0/0/2 0.64 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:15:15,748: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:15:15,748: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:15,748: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:19,758: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:19,758: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:23,768: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:23,768: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] sge:405 2013-06-25 22:15:28,166: qstat: ['[email protected] BIP 0/0/2 0.64 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:15:28,167: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:15:28,167: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:28,167: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:32,178: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:32,178: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:36,188: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:36,188: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] sge:405 2013-06-25 22:15:40,584: qstat: ['[email protected] BIP 0/0/2 0.64 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:15:40,585: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:15:40,585: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:40,585: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:44,588: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:44,588: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:48,598: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:48,598: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] sge:405 2013-06-25 22:15:52,995: qstat: ['[email protected] BIP 0/0/2 0.75 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:15:52,996: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:15:52,996: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:52,996: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:15:56,998: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:15:56,998: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:16:01,008: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:01,008: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] sge:405 2013-06-25 22:16:05,406: qstat: ['[email protected] BIP 0/0/2 0.75 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:16:05,407: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:16:05,407: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:05,407: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:16:09,418: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:09,418: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:16:13,422: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:13,422: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] sge:405 2013-06-25 22:16:17,821: qstat: ['[email protected] BIP 0/0/2 0.75 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:16:17,821: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:16:17,821: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:17,822: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:16:21,832: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:21,832: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1676 2013-06-25 22:16:25,842: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:25,842: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] sge:405 2013-06-25 22:16:30,241: qstat: ['[email protected] BIP 0/0/2 0.76 lx24-amd64 '] [DEBUG] master:1650 2013-06-25 22:16:30,242: S&S: SGE..OK; post_start_script..Unstarted; [DEBUG] master:1676 2013-06-25 22:16:30,242: Monitor adding service 'post_start_script' [DEBUG] pss:65 2013-06-25 22:16:30,242: Not adding post_start_script svc; it already ran (False) or the cluster was not yet initialized (None) [DEBUG] master:1247 2013-06-25 22:16:32,585: Checking for new version of CloudMan [DEBUG] misc:512 2013-06-25 22:16:32,585: Getting metadata 'revision' for file 'cm.tar.gz' from bucket 'cm-81a2ec9d11e15570ea7136a31533170e' [DEBUG] misc:512 2013-06-25 22:16:33,639: Getting metadata 'revision' for file 'cm.tar.gz' from bucket 'cloudman' [DEBUG] master:1251 2013-06-25 22:16:33,690: Revision number for user's CloudMan: '262'; revision number for default CloudMan: '262' [DEBUG] ec2:48 2013-06-25 22:16:33,690: Gathering instance type, attempt 0 … [DEBUG] pss:74 2013-06-25 22:18:00,864: post_start_script service prerequisites OK (i.e., all other services running), checking if post_start_script was provided... [DEBUG] pss:91 2013-06-25 22:18:00,899: Cluster bucket 'cm-81a2ec9d11e15570ea7136a31533170e' found; looking for post start script 'post_start_script' [DEBUG] misc:440 2013-06-25 22:18:00,960: Failed to get file 'post_start_script' from bucket 'cm-81a2ec9d11e15570ea7136a31533170e': S3ResponseError: 404 Not Found NoSuchKeyThe specified key does not exist.post_start_scriptC0097A621B19D07CJtBjACdzRU2Ko+A4xAe5hCPYd3p1EfXw6Hx0Y5DjXLPU7XS3CZyinJs6CMbxxXUS [DEBUG] pss:102 2013-06-25 22:18:00,960: post_start_script does not exist or could not be downloaded; continuing without running it. Any idea how I can get this started and running? Thanks! -Brad
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ To search Galaxy mailing lists use the unified search at: http://galaxyproject.org/search/mailinglists/
