Hello, The track type you selected is not supported. See the custom track page for a list of allowed formats and with links to help for each.
Maybe another format would be appropriate: http://genome.ucsc.edu/goldenPath/help/bigWig.html Please let us know if this does not help, Jennifer ------------------------------------------------ Jennifer Jackson UCSC Genome Bioinformatics Group ----- "Ricardo Verdugo" <[email protected]> wrote: > From: "Ricardo Verdugo" <[email protected]> > To: [email protected] > Sent: Sunday, September 27, 2009 7:16:15 PM GMT -08:00 US/Canada Pacific > Subject: [Genome] Array custom array problem > > Hello: > > I followed the Wiki instruction s to create a custom array track but I > > get this error: > > Error Unrecognized format type=array line 2 of custom track > > This is a sample of the file (also attached): > > track type="array" expScale=6.49 expStep=1 > expNames > = > "Adrenals > ,Brown_Fat > ,Brain > ,Colon > ,Duodenum > ,Heart > ,Ileum > ,Jejunum,Kidney,Liver,Lung,Muscle,Spleen,Stomach,Testis,White_Fat" > name="Tissuesurvey16" description="Illumina Mouse-6 V1.1 R1 Expression > > Survey of 16 Mouse Tissues" > 105290026 chr10 36553035 36553085 50 + > 36553035 36553085 0 1 36553035, > > 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.23 > ,-6.43 > ,-4.69 > ,-6.25 > ,-6.36,-5.24,-6.3,-6.37,-6.48,-6.49,-6.47,-4.43,-6.47,-6.39,-6.46,-6.4 > 610369 chr7 117951434 117953327 50 + > 117951434 117953327 0 2 > 117951434,117953309, 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.13 > ,-6.3 > ,-5.89 > ,-5.37 > ,-6.01,-6.32,-5.94,-5.99,-6.22,-6.49,-6.19,-6.17,-5.77,-5.83,-6.41,-6.23 > 1450014 chr19 7399897 7399947 50 - 7399897 7399947 0 > 1 7399897, 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.46 > ,-6.44 > ,-6.32 > ,-6.34 > ,-6.48,-6.4,-6.39,-6.36,-6.34,-6.39,-6.31,-6.43,-6.38,-6.49,-6.25,-6.39 > 380019 chr1 196957530 196957580 50 - > 196957530 196957580 0 1 > 196957530, 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -5.04 > ,-4.33 > ,-5.88 > ,-3.57 > ,-3.26,-4.95,-3.19,-3.27,-4.77,-4.14,-5.04,-5.59,-4.61,-3.79,-6.49,-4.91 > 100430441 chr2 103103512 103103562 50 - > 103103512 103103562 0 1 > 103103512, 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.3 > ,-6.42 > ,-6.44 > ,-6.38 > ,-6.39,-6.39,-6.35,-6.37,-6.39,-6.27,-6.38,-6.39,-6.39,-6.36,-6.43,-6.49 > 610088 chr14 99476525 99476575 50 - > 99476525 99476575 0 1 99476525, 16 > > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.29 > ,-6.31 > ,-6.28 > ,-6.49 > ,-6.27,-6.38,-6.25,-6.26,-6.39,-6.17,-6.37,-6.06,-6.22,-6.28,-5.95,-6.25 > 870181 chr9 32206438 32206488 50 + > 32206438 32206488 0 1 32206438, 16 > > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.46 > ,-6.37 > ,-6.49 > ,-6.42 > ,-6.39,-6.38,-6.39,-6.47,-1.47,-6.39,-6.39,-6.48,-6.01,-6.43,-6.37,-6.45 > 103060390 chr9 40085439 40085489 50 + > 40085439 40085489 0 1 40085439, > > 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -6.44 > ,-6.44 > ,-6.24 > ,-6.43 > ,-6.41,-6.49,-6.47,-6.47,-6.39,-6.31,-5.6,-6.42,-6.42,-6.42,-6.47,-6.38 > 4480390 chr1 165187948 165187998 50 - > 165187948 165187998 0 1 > 165187948, 16 > 0,1,2,3,4,5,6,7,8,9,10,11,12,13,14,15 > -4.18 > ,-4.73 > ,-5.99 > ,-6.45 > ,-4.84,-2.73,-6.29,-5.67,-5.81,-6.49,-5.25,-2.75,-5.67,-6.22,-6.07,-4.16 > > > Thank you in advance for your assistance. > > Ricardo. > > > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > Ricardo A. Verdugo S., D.V.M. Ph.D. > Postdoctoral Fellow > Gary Churchill Group > The Jackson Laboratory > 600 Main Street, > Bar Harbor, ME 04609 > [email protected] > +1-207-288-6715 > +1-207-288-6847 Fax > ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
