Hello Einat, The squirrel genome is now located on our ftp server. ftp://hgdownload.cse.ucsc.edu/gbdb/speTri1/
At this time, we have no plans to make, test or publish pair-wise alignments for this genome. However, instructions for creating this data on your own are located here: http://genomewiki.cse.ucsc.edu/index.php/Whole_genome_alignment_howto We hope these instructions help to get you started. Please let us know if you have any questions. Jennifer Jackson UCSC Genome Bioinformatics Group _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
