On Tue, 10 Mar 2009, [email protected] wrote:
> Message: 3 > Date: Tue, 10 Mar 2009 10:08:38 -0700 > From: Doug Wolfgram <[email protected]> > Subject: [Genome] snps/phenotypes > To: [email protected] > Message-ID: <[email protected]> > Content-Type: text/plain; charset=US-ASCII; format=flowed; delsp=yes > > Can anyone tell me if there is a published list of snps/phenotypes > anywhere? It doesn't have to be comprehensive, but I'd like a summary > of research done to date to determine which snps contribute to which > of the various phenotypes. Especially diseases-related phenotypes. > > Thanks! > > ------------- > Doug Wolfgram > [email protected] > There are several sets, none complete. The most complete set is the 500 or so LSDBs (Locus Specific Databases), but very difficult to access all of them. Many are listed on the HGVS website (Human Genome Variation Society). There is also HGMD, PhenCode, and Snpedia, and the GWAS SNPs. The GWAS SNPs are at http://www.biomedcentral.com/content/pdf/1471-2350-10-6.pdf supplement file 2 Google should find the rest easily. Belinda _______________________________________________ Genome maillist - [email protected] http://www.soe.ucsc.edu/mailman/listinfo/genome
