Your login.pl script is your own business. This has nothing
to do with the genome browser. Please check your script.
--Hiram
WANG Wuqi wrote:
> Hi Hiram,
>
>
>
> Because space not enough, our MySQL database(version 4.0) is migrated (
> eg. relocated) from /var/lib/mysql to /data/mysql.
>
> In my.cnf, I set
>
> datadir=/data/mysql from /var/lib/mysql and
>
> socket =/data/mysql from /var/lib/mysql,
>
>
>
> MySQL databse can start and work well but our genome browser mirror site
> encounters below errors:
>
> -------------------------------------start mysql by user mysql:
>
> Software error:
>
> DBI connect('database=acl;host=localhost','atif',...) failed:
>
> Can't connect to local MySQL server
>
> through socket '/var/lib/mysql/mysql.sock' (2)
>
> at /var/www/cgi-bin/login.pl line 36
>
>
>
> For help, please send mail to the webmaster (r...@localhost),
>
> giving this error message and the time and date of the error.
>
>
>
> ---------------------------------start mysql by user:
>
> Internal Server Error
>
> The server encountered an internal error or misconfiguration
>
> and was unable to complete your request.
>
>
>
> Please contact the server administrator, r...@localhost and inform
>
> them of the time the error occurred,
>
> and anything you might have done that may have caused the error.
>
> More information about this error may be available in the server error
> log.
>
>
>
> Apache/2.0.52 (CentOS) Server at ucsc.gis.a-star.edu.sg Port 80
>
> ----------------------------------------.
>
>
>
> When re-set
>
> socket=/var/lib/mysql (original path) and
>
> datadir=/data/mysql (new location),
>
>
>
> Genome browser mirror site works well, everything is ok.
>
>
>
> I want to know whether "socket=/var/lib/mysql" in Genome browser mirror
>
> is as default one, if yes, how to change this socket? , if no, where is
>
> wrong for this new socket path?
>
>
>
>
>
> Thanks & Regards
>
>
>
> Wuqi
>
>
>
>
>
>
>
>
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