Hi Donna, Thanks so much for the reply. If you do add this link to your mirror site can you possibly let me know? Or should I just check your website frequently? We have many of our customers interested in generating products we make at Agilent based upon the latest cow genome so this information will be very helpful.
And thanks for such a speedy reply! Much appreciated. Fred Fred P. Ernani, Ph.D. Sr. Product Manager Emerging Genomics Applications Agilent Technologies 5301 Stevens Creek Blvd. MS-WE Santa Clara, CA 95051 P: +1(408)553-2809 F: +1(408)553-4076 E: [email protected] Working with next-generation sequencers? Check out Agilent's new SureSelect Target Enrichment System: MORE INFORMATION -----Original Message----- From: Donna Karolchik [mailto:[email protected]] Sent: Monday, May 11, 2009 5:09 PM To: Galt Barber Cc: ERNANI,FRED (A-Americas,ex1); NOVAK,BARBARA A (A-Americas,ex1); [email protected] Subject: Re: [Genome] Bovine genome -- when will it be updated in the UCSC Genome Browser? hi Fred, One of our mirrors has indicated that they may host the 4.2 release. If this happens, we will add a link from our site to their browser. -Donna ---------------- Donna Karolchik UCSC Genome Browser Project Manager http://genome.ucsc.edu Galt Barber wrote: > We have the latest freeze from Baylor already: BCM 4.0. > > There is a 4.2 release which is not a freeze > and has only minor improvements. > > There is also another competing assembly from > University of Maryland (UMD2) which uses > a different process and claims slightly better coverage. > > The recent papers in Science and elsewere > which were just released at the end > of the cow sequencing project are all about 4.0. > The gene models were generated on 3.1. > None of the papers even mention 4.2 at all. > > No new cow dna sequences have been generated since BCM 3.1. > > -Galt > > > On Mon, 11 May 2009, [email protected] wrote: > >> Hello, >> >> >> >> I'm writing because I would like to know when the UCSC Genome Browser will >> be updated to contain the latest version of the Bovine genome. Thank you >> for any information you can provide. >> >> >> >> Best regards, >> >> Fred >> >> >> >> Fred P. Ernani, Ph.D. >> >> Sr. Product Manager >> >> Emerging Genomics Applications >> >> Agilent Technologies >> >> 5301 Stevens Creek Blvd. MS-WE >> >> Santa Clara, CA 95051 >> >> P: +1(408)553-2809 >> >> F: +1(408)553-4076 >> >> E: [email protected] <mailto:[email protected]> >> >> >> >> >> >> Working with next-generation sequencers? Check out Agilent's new SureSelect >> Target Enrichment System: MORE INFORMATION >> <http://www.opengenomics.com/Products/Application/Target_Enrichment> >> >> >> >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
