hi Fred, I don't know what the mirror's schedule will be for producing this browser. Probably the best thing to do is to check our site in a month or so, and if you don't spot the link, send another email to the genome mailing list asking about it.
Cheers, -Donna [email protected] wrote: > Hi Donna, > > Thanks so much for the reply. If you do add this link to your mirror site > can you possibly let me know? Or should I just check your website > frequently? We have many of our customers interested in generating products > we make at Agilent based upon the latest cow genome so this information will > be very helpful. > > And thanks for such a speedy reply! Much appreciated. > > Fred > > Fred P. Ernani, Ph.D. > Sr. Product Manager > Emerging Genomics Applications > Agilent Technologies > 5301 Stevens Creek Blvd. MS-WE > Santa Clara, CA 95051 > P: +1(408)553-2809 > F: +1(408)553-4076 > E: [email protected] > > Working with next-generation sequencers? Check out Agilent's new SureSelect > Target Enrichment System: MORE INFORMATION > > > -----Original Message----- > From: Donna Karolchik [mailto:[email protected]] > Sent: Monday, May 11, 2009 5:09 PM > To: Galt Barber > Cc: ERNANI,FRED (A-Americas,ex1); NOVAK,BARBARA A (A-Americas,ex1); > [email protected] > Subject: Re: [Genome] Bovine genome -- when will it be updated in the UCSC > Genome Browser? > > hi Fred, > > One of our mirrors has indicated that they may host the 4.2 release. If > this happens, we will add a link from our site to their browser. > > -Donna > ---------------- > Donna Karolchik > UCSC Genome Browser Project Manager > http://genome.ucsc.edu > > > Galt Barber wrote: >> We have the latest freeze from Baylor already: BCM 4.0. >> >> There is a 4.2 release which is not a freeze >> and has only minor improvements. >> >> There is also another competing assembly from >> University of Maryland (UMD2) which uses >> a different process and claims slightly better coverage. >> >> The recent papers in Science and elsewere >> which were just released at the end >> of the cow sequencing project are all about 4.0. >> The gene models were generated on 3.1. >> None of the papers even mention 4.2 at all. >> >> No new cow dna sequences have been generated since BCM 3.1. >> >> -Galt >> >> >> On Mon, 11 May 2009, [email protected] wrote: >> >>> Hello, >>> >>> >>> >>> I'm writing because I would like to know when the UCSC Genome Browser will >>> be updated to contain the latest version of the Bovine genome. Thank you >>> for any information you can provide. >>> >>> >>> >>> Best regards, >>> >>> Fred >>> >>> >>> >>> Fred P. Ernani, Ph.D. >>> >>> Sr. Product Manager >>> >>> Emerging Genomics Applications >>> >>> Agilent Technologies >>> >>> 5301 Stevens Creek Blvd. MS-WE >>> >>> Santa Clara, CA 95051 >>> >>> P: +1(408)553-2809 >>> >>> F: +1(408)553-4076 >>> >>> E: [email protected] <mailto:[email protected]> >>> >>> >>> >>> >>> >>> Working with next-generation sequencers? Check out Agilent's new SureSelect >>> Target Enrichment System: MORE INFORMATION >>> <http://www.opengenomics.com/Products/Application/Target_Enrichment> >>> >>> >>> >>> _______________________________________________ >>> Genome maillist - [email protected] >>> https://lists.soe.ucsc.edu/mailman/listinfo/genome >>> >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
