Dear Genome:
I am using UCSC genome browser to do some analysis about honey bee(A.mellifera)
genome. For my purpose, I use the NCBI Genes track under A.mellifera genome.
However, when I manually check the sequence for a same refseq ID between UCSC
and NCBI, I found there were always some difference among them. The attach file
is a sequence alignment for XM_392354 between the resources I mentioned above.
Because my analysis is very sensitive to the length of gene. Could you tell me
why there is difference between the same refseq gene from different resources
and what resource is the most current one? Thank you very much
Jia Zeng
CLUSTAL 2.0.11 multiple sequence alignment
apiMel2_modelRefGene_XM_392354
ATGAAATCCACCCACGGCACGGGCGTGGATGTTTCCAGCGTCGAGGACGA 50
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
AATCTGCGTCCTCGGCTTTGTGCGGTCGCGTTCCACACCGGAAACAGGCA 100
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CATGGAGGCACATCCGCGCCGTTATGGCCGCGTTTCCGCCTGTTTGTCCT 150
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
ACGAGGAAACCTGTCCTGGAGCATCCGTGCATCGCGTTCGACTTCATACA 200
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CGTCTGTTTGAAGATCGGTCCGGTCGGGGAAGTGGGCGGCGTCAGGCTGC 250
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CGTTGCAATCATTACATGGGTACGGATCTGTGTTCATGTACTCGGCGTCG 300
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
ACGAGTCCCGGGGGTGGAGGTGGCCAGGGTGGCGGAGGCGGAGGTGAAGT 350
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
GACCCTCCGCCTCCGCGAACCTGAGGATATTCCCGAAGAAGTTCTTGCAC 400
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
GCCTCGAGGACACGGCCACCCTCTCCATCTCTCTTCAAAGCGACGCAGTG 450
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
TTGAGGCTGGGGGCAGCTGGCACGGGAAACGGGAATTTAGAATTGTTCGA 500
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
TAGTGAGAGCGGGCCGGACCTCACACTATCACCTCAGACCTTCACGTCGA 550
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CGGCGGAGGCCTTCATCAATGACAATAGTGATAGTCTTGGTGTTCCAGGA 600
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
GACAACGATACGGGTAGCAGCGAGGAATCGAGACCTGGGGGTGGGGATCC 650
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
TGGAAAGTTGGGGGTGAAGAAACCAAGACCGAAGGCTTCGTCGCCCAACC 700
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
GACAGGGACCACAGCAGTGCCAGGTCTGCGGGAAGGTGTTCAACAACGCA 750
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
TCGGCGCTCACGAAGCACAAGCTGACGCACAGTGACGAGAGGAAATATGT 800
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
GTGCACGATGTGCGGCAAGGCGTTCAAGCGGCAGGACCACTTTCCAACCA 850
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CCGGTCCTCACACACCAAACACACCGGGAAGTAATCCCAGCACGCCAAGC 900
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
ACACCGGGAGCGGCGTCGACGCCCAACGGCCATGGACATCCGGCCTTAAA 950
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
ACAATTGCTCGCCACGGAACCGTCACAGGCGCAGCAGCAAAAGAGTGCCA 1000
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CGTCTCCTGGTGCTAGCAACGATGGTCTCACGAAACAGCAACTGGACAAT 1050
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
TCATCAAGCACAGTCACAGCGCAAATTCAAAAAACGCAAAAACCGTCCGT 1100
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
CAAGTCCACAACTTCATCTGGCAGCGTTTCGAATAATTCTGGAAGTTCAA 1150
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
ATGCAACAAATAACGCGAGATCCAGCCCCAAACCTAAAGTCTGGAGTCAC 1200
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
GTACAGACGCATGTGGAGCAGCAATACCAGCAACACCAACAGTTTCATCC 1250
gi|110756378|ref|XM_392354.3|
--------------------------------------------------
apiMel2_modelRefGene_XM_392354
ACAGCAACGGTACAG--TCAGCAGCCTTATCAGCATCATCAGTATCCGCA 1298
gi|110756378|ref|XM_392354.3|
ATGGCGGAGGAAAAGGGTAAAGAGGATAAACAACAGCAACAGCAAGCACA 50
* ** ** * ** * * ** * * ** ** ** ***
* * **
apiMel2_modelRefGene_XM_392354
ACAGTATCCCCCGGATTATCTGTATCGGTTCTCGTTGCA---GCATCAGC 1345
gi|110756378|ref|XM_392354.3|
GCAGCAAGCACAGCAACAGCAACAACAGCAACCGCAACAACAGCATCAGC 100
*** * * * * * * * * * * ** **
********
apiMel2_modelRefGene_XM_392354
AACAACAGCCACAGGCTAATTCGCCAGGAGGTGGAAATGTGGGGAAAAGC 1395
gi|110756378|ref|XM_392354.3|
AACAACAGCCACAGGCTAATTCGCCAGGAGGTGGAAATGTGGGGAAAAGC 150
**************************************************
apiMel2_modelRefGene_XM_392354
AGCCCGTCGCCGGGAAATTCGGCATCCCCTGGCACTGTGACAGCGTCCAA 1445
gi|110756378|ref|XM_392354.3|
AGCCCGTCGCCGGGAAATTCGGCATCCCCTGGCACTGTGACAGCGTCCAA 200
**************************************************
apiMel2_modelRefGene_XM_392354
CAAGTCGCAGACCGAACCGAAACCGGTCGAGTGCAATTTGTGCCATCGAA 1495
gi|110756378|ref|XM_392354.3|
CAAGTCGCAGACCGAACCGAAACCGGTCGAGTGCAATTTGTGCCATCGAA 250
**************************************************
apiMel2_modelRefGene_XM_392354
AATTCAAAAATATACCGGCGCTAAATGGCCACATGAGACTCCATGGCGGT 1545
gi|110756378|ref|XM_392354.3|
AATTCAAAAATATACCGGCGCTAAATGGCCACATGAGACTCCATGGCGGT 300
**************************************************
apiMel2_modelRefGene_XM_392354
TACTTCAAAAAGGATGCTGAGAACAAGAAAAGCGAGAAGAAAGAGGTTGT 1595
gi|110756378|ref|XM_392354.3|
TACTTCAAAAAGGATGCTGAGAACAAGAAAAGCGAGAAGAAAGAGGTTGT 350
**************************************************
apiMel2_modelRefGene_XM_392354
CGGTCCGCCTTTACAAACCGCGTCTGTCAGCGTTAGAGCGCTCATTGAAG 1645
gi|110756378|ref|XM_392354.3|
CGGTCCGCCTTTACAAACCGCGTCTGTCAGCGTTAGAGCGCTCATTGAAG 400
**************************************************
apiMel2_modelRefGene_XM_392354
AAAAAATTATACAGAAAAGAACGACTGAAATGTTTTGCCTCGTTTTAGCA 1695
gi|110756378|ref|XM_392354.3|
AAAAAATTATACAGAAAAGAACGACTGAAATGTTTTGCCTCGTTTTAGCA 450
**************************************************
apiMel2_modelRefGene_XM_392354
GCGGACACAAATTCAAATCAACAGGCACGCACAAACGCAACAGTTTTTAC 1745
gi|110756378|ref|XM_392354.3|
GCGGACACAAATTCAAATCAACAGGCACGCACAAACGCAACAGTTTTTAC 500
**************************************************
apiMel2_modelRefGene_XM_392354
CACCCAAGCCGACAATGCGTCGCAAATTTCCGGTAAAACGAGCTTCGCGG 1795
gi|110756378|ref|XM_392354.3|
CACCCAAGCCGACAATGCGTCGCAAATTTCCGGTAAAACGAGCTTCGCGG 550
**************************************************
apiMel2_modelRefGene_XM_392354
TACCAGCACCGCCTCCATTGGCCTCCGCGGAAAAGGTCCGCAGACTTTCG 1845
gi|110756378|ref|XM_392354.3|
TACCAGCACCGCCTCCATTGGCCTCCGCGGAAAAGGTCCGCAGACTTTCG 600
**************************************************
apiMel2_modelRefGene_XM_392354
GATGGCGAGCACTTCCGGCAGCCCAATGTCACCGTTTCCGGCCACACGAC 1895
gi|110756378|ref|XM_392354.3|
GATGGCGAGCACTTCCGGCAGCCCAATGTCACCGTTTCCGGCCACACGAC 650
**************************************************
apiMel2_modelRefGene_XM_392354
CGTGCAAAAGCAGCTGCAGGAAGCGCAGACCCAGGCTCAGGCGCAGGCGC 1945
gi|110756378|ref|XM_392354.3|
CGTGCAAAAGCAGCTGCAGGAAGCGCAGACCCAGGCTCAGGCGCAGGCGC 700
**************************************************
apiMel2_modelRefGene_XM_392354
TGGCCGACATGATCTTGAAGGGAACTACTAAAATGGCTGTGAAAAGAACA 1995
gi|110756378|ref|XM_392354.3|
TGGCCGACATGATCTTGAAGGGAACTACTAAAATGGCTGTGAAAAGAACA 750
**************************************************
apiMel2_modelRefGene_XM_392354
ACTTCGGATCCCGGGCAAAGATTGCATCTGACTTATCAGACATCGGTTCA 2045
gi|110756378|ref|XM_392354.3|
ACTTCGGATCCCGGGCAAAGATTGCATCTGACTTATCAGACATCGGTTCA 800
**************************************************
apiMel2_modelRefGene_XM_392354
ATCGACGACTAGTTACTCTGAAGACGGTGGTTATTTTAGCCCAAGCCTTC 2095
gi|110756378|ref|XM_392354.3|
ATCGACGACTAGTTACTCTGAAGACGGTGGTTATTTTAGCCCAAGCCTTC 850
**************************************************
apiMel2_modelRefGene_XM_392354
AAGATGAGGTGTTTCAACAAGTCACTGCAGTTCCTGACAGCGTTCTTCTT 2145
gi|110756378|ref|XM_392354.3|
AAGATGAGGTGTTTCAACAAGTCACTGCAGTTCCTGACAGCGTTCTTCTT 900
**************************************************
apiMel2_modelRefGene_XM_392354
CATGCTACTCAATTGGATTCACTTCAATTAGCCGAGTTCAGCACGTACGG 2195
gi|110756378|ref|XM_392354.3|
CATGCTACTCAATTGGATTCACTTCAATTAGCCGAGTTCAGCACGTACGG 950
**************************************************
apiMel2_modelRefGene_XM_392354
TGCCCAATACACGGAGAGCCCGCACACGTTACCCACCCAGTCCCCCCTGC 2245
gi|110756378|ref|XM_392354.3|
TGCCCAATACACGGAGAGCCCGCACACGTTACCCACCCAGTCCCCCCTGC 1000
**************************************************
apiMel2_modelRefGene_XM_392354
CATCGCCGTTGACGAGACACGACAGCCCCAGCTTCACATATCCAACGCCA 2295
gi|110756378|ref|XM_392354.3|
CATCGCCGTTGACGAGACACGACAGCCCCAGCTTCACATATCCAACGCCA 1050
**************************************************
apiMel2_modelRefGene_XM_392354
CCAGCGAGCCAGGAGGGCCTTCTCACGGGCAGCTTCCCCCTGCTCAGCCC 2345
gi|110756378|ref|XM_392354.3|
CCAGCGAGCCAGGAGGGCCTTCTCACGGGCAGCTTCCCCCTGCTCAGCCC 1100
**************************************************
apiMel2_modelRefGene_XM_392354
TCAAGAGGATCCGGAGGCCGTGAGACAAGTCTCGTCACCGTTGTCCGCTG 2395
gi|110756378|ref|XM_392354.3|
TCAAGAGGATCCGGAGGCCGTGAGACAAGTCTCGTCACCGTTGTCCGCTG 1150
**************************************************
apiMel2_modelRefGene_XM_392354
CCTTCTACGCGAGCACCATGTCCTCGGCGGCTGCCGTCGAGGAAGCTCTG 2445
gi|110756378|ref|XM_392354.3|
CCTTCTACGCGAGCACCATGTCCTCGGCGGCTGCCGTCGAGGAAGCTCTG 1200
**************************************************
apiMel2_modelRefGene_XM_392354
AGCGAGGTGTTGCCAGGCGAATCCGAAGCAGACACCGACCTGTACGGGTC 2495
gi|110756378|ref|XM_392354.3|
AGCGAGGTGTTGCCAGGCGAATCCGAAGCAGACACCGACCTGTACGGGTC 1250
**************************************************
apiMel2_modelRefGene_XM_392354
CGGTTCACCTAATCCTCACTCGCCACTGCCAAGCCCGTTATCGGCGACCC 2545
gi|110756378|ref|XM_392354.3|
CGGTTCACCTAATCCTCACTCGCCACTGCCAAGCCCGTTATCGGCGACCC 1300
**************************************************
apiMel2_modelRefGene_XM_392354
CGGCACCGTCGCCGTTGTCCTCGTTGCCGCCCTCCTCGGTCTCGTCACCC 2595
gi|110756378|ref|XM_392354.3|
CGGCACCGTCGCCGTTGTCCTCGTTGCCGCCCTCCTCGGTCTCGTCACCC 1350
**************************************************
apiMel2_modelRefGene_XM_392354
GGCCCCGTGTCGTTCACGGGCACGAGTTTCCCCGTGTCGCCACACCACGC 2645
gi|110756378|ref|XM_392354.3|
GGCCCCGTGTCGTTCACGGGCACGAGTTTCCCCGTGTCGCCACACCACGC 1400
**************************************************
apiMel2_modelRefGene_XM_392354
CCTCCAGAATCAGATGATGCCCAACTCGGAGGATCCCCTGCTCTCCTCGA 2695
gi|110756378|ref|XM_392354.3|
CCTCCAGAATCAGATGATGCCCAACTCGGAGGATCCCCTGCTCTCCTCGA 1450
**************************************************
apiMel2_modelRefGene_XM_392354
CCCCGAAAGACTTCACCACGGCCAGCCGGAGACGGTTCGAGTTCCAATCG 2745
gi|110756378|ref|XM_392354.3|
CCCCGAAAGACTTCACCACGGCCAGCCGGAGACGGTTCGAGTTCCAATCG 1500
**************************************************
apiMel2_modelRefGene_XM_392354
TACAAATTTATCACCAGCCAGAACTTGGTGGACTTTGGGCTGGGTAACGG 2795
gi|110756378|ref|XM_392354.3|
TACAAATTTATCACCAGCCAGAACTTGGTGGACTTTGGGCTGGGTAACGG 1550
**************************************************
apiMel2_modelRefGene_XM_392354
CAGCCTGGCCGGGATCGTGGTGGACAACAACGGCGAGTTCAAGCTCATCC 2845
gi|110756378|ref|XM_392354.3|
CAGCCTGGCCGGGATCGTGGTGGACAACAACGGCGAGTTCAAGCTCATCC 1600
**************************************************
apiMel2_modelRefGene_XM_392354
AGACGGCGGGGTTGCAGAAGACTAATGTGCTGGTGCAAACTGGCTCCCTG 2895
gi|110756378|ref|XM_392354.3|
AGACGGCGGGGTTGCAGAAGACTAATGTGCTGGTGCAAACTGGCTCCCTG 1650
**************************************************
apiMel2_modelRefGene_XM_392354
AGCCCGGCCCTCGCGTTCAAGAAGGAGATGAGGCTGGCGACACCCAAGAT 2945
gi|110756378|ref|XM_392354.3|
AGCCCGGCCCTCGCGTTCAAGAAGGAGATGAGGCTGGCGACACCCAAGAT 1700
**************************************************
apiMel2_modelRefGene_XM_392354
GGAGCCCGTCACCGTCAACCTTGGCCTGAACGTGCAGACGAACGTGCATC 2995
gi|110756378|ref|XM_392354.3|
GGAGCCCGTCACCGTCAACCTTGGCCTGAACGTGCAGACGAACGTGCATC 1750
**************************************************
apiMel2_modelRefGene_XM_392354
AGTACAACGCCGGCCAGTTCAATCAGCAACAGGTGGTGAACCCGACCAAG 3045
gi|110756378|ref|XM_392354.3|
AGTACAACGCCGGCCAGTTCAATCAGCAACAGGTGGTGAACCCGACCAAG 1800
**************************************************
apiMel2_modelRefGene_XM_392354
TTTCTCATACAGACGAACGTGGCCAAGGGTGGCAGTCTGAGGCAGAAGGT 3095
gi|110756378|ref|XM_392354.3|
TTTCTCATACAGACGAACGTGGCCAAGGGTGGCAGTCTGAGGCAGAAGGT 1850
**************************************************
apiMel2_modelRefGene_XM_392354
GGCCGCCTCCGGTGGAGGGAACCTGCCTGTCCCGGTCGAGCAGATCAAGG 3145
gi|110756378|ref|XM_392354.3|
GGCCGCCTCCGGTGGAGGGAACCTGCCTGTCCCGGTCGAGCAGATCAAGG 1900
**************************************************
apiMel2_modelRefGene_XM_392354
AGGAGCTGTTGGACGAGGACGTGTTCCTTAATCCCAGCAACGTGCCGGCT 3195
gi|110756378|ref|XM_392354.3|
AGGAGCTGTTGGACGAGGACGTGTTCCTTAATCCCAGCAACGTGCCGGCT 1950
**************************************************
apiMel2_modelRefGene_XM_392354
GGCAGCCCTGTCAGGCAGTGCAGGAAAAGGCCACGCATGGACGGGGGGGG 3245
gi|110756378|ref|XM_392354.3|
GGCAGCCCTGTCAGGCAGTGCAGGAAAAGGCCACGCATGGACGGGGGGGG 2000
**************************************************
apiMel2_modelRefGene_XM_392354
AGGCCTCTACGCGAGCGCCTCGTATCCGTCCAGATTGAGGAAAGCCTGCG 3295
gi|110756378|ref|XM_392354.3|
AGGCCTCTACGCGAGCGCCTCGTATCCGTCCAGATTGAGGAAAGCCTGCG 2050
**************************************************
apiMel2_modelRefGene_XM_392354
ACAGGCATTGGGACAGCAGCTACACGCCGCCACCGATCTTGGATCCATCC 3345
gi|110756378|ref|XM_392354.3|
ACAGGCATTGGGACAGCAGCTACACGCCGCCACCGATCTTGGATCCATCC 2100
**************************************************
apiMel2_modelRefGene_XM_392354
CGCCCCGGGCCGGGCCTCTACGCCAGGCTGCATCAGTACGAGAGGGATTC 3395
gi|110756378|ref|XM_392354.3|
CGCCCCGGGCCGGGCCTCTACGCCAGGCTGCATCAGTACGAGAGGGATTC 2150
**************************************************
apiMel2_modelRefGene_XM_392354
TGACTTCAGCTCCGACGATTCCCAAGGGAACGACGGCCCTCCACCTAGAA 3445
gi|110756378|ref|XM_392354.3|
TGACTTCAGCTCCGACGATTCCCAAGGGAACGACGGCCCTCCACCTAGAA 2200
**************************************************
apiMel2_modelRefGene_XM_392354
TTAATATCGGCACGAGGTATCAGGCTACGATACCACCGGTCGGCAGCGAC 3495
gi|110756378|ref|XM_392354.3|
TTAATATCGGCACGAGGTATCAGGCTACGATACCACCGGTCGGCAGCGAC 2250
**************************************************
apiMel2_modelRefGene_XM_392354
GGGGACAGAGGAAAGGGGGAGCCGGAGGCCGACCATCTGCTCTGGGATCC 3545
gi|110756378|ref|XM_392354.3|
GGGGACAGAGGAAAGGGGGAGCCGGAGGCCGACCATCTGCTCTGGGATCC 2300
**************************************************
apiMel2_modelRefGene_XM_392354
TGGTATAAATAACGTGCTGACGGACAATGAATTGGATATGTACCTACAAT 3595
gi|110756378|ref|XM_392354.3|
TGGTATAAATAACGTGCTGACGGACAATGAATTGGATATGTACCTACAAT 2350
**************************************************
apiMel2_modelRefGene_XM_392354
TTGCATGCTGCGCCGCGGTACCAGGTGGAGGAAGAAACAAAGAATACGCG 3645
gi|110756378|ref|XM_392354.3|
TTGCATGCTGCGCCGCGGTACCAGGTGGAGGAAGAAACAAAGAATACGCG 2400
**************************************************
apiMel2_modelRefGene_XM_392354
CTTCATCTGCTGCACATGTGCAAAGGGAATATTCATGAGGCCATGCTGAA 3695
gi|110756378|ref|XM_392354.3|
CTTCATCTGCTGCACATGTGCAAAGGGAATATTCATGAGGCCATGCTGAA 2450
**************************************************
apiMel2_modelRefGene_XM_392354
GTTAATGAGACCAACACCTCCGTTGCCAGCGGAACACCCGTTGCTCAGTT 3745
gi|110756378|ref|XM_392354.3|
GTTAATGAGACCAACACCTCCGTTGCCAGCGGAACACCCGTTGCTCAGTT 2500
**************************************************
apiMel2_modelRefGene_XM_392354
ACGAGTGTCACGAGTCCGACCGATGGACGTCGCAAGAGATGGACGCATTC 3795
gi|110756378|ref|XM_392354.3|
ACGAGTGTCACGAGTCCGACCGATGGACGTCGCAAGAGATGGACGCATTC 2550
**************************************************
apiMel2_modelRefGene_XM_392354
TACCAGGGCCTGTTGAAGTACAACAAGGATTTCTCTGCGATCTCGCGGGA 3845
gi|110756378|ref|XM_392354.3|
TACCAGGGCCTGTTGAAGTACAACAAGGATTTCTCTGCGATCTCGCGGGA 2600
**************************************************
apiMel2_modelRefGene_XM_392354
CGTGGGTGGCAAGTCCGCGAAACAATGCGTGCAATTCTATTATCTGTGGA 3895
gi|110756378|ref|XM_392354.3|
CGTGGGTGGCAAGTCCGCGAAACAATGCGTGCAATTCTATTATCTGTGGA 2650
**************************************************
apiMel2_modelRefGene_XM_392354
AGAGGCTCTGCCCGGACGAATACAGCAGACTTCGTGTTCGCCACGGTAAA 3945
gi|110756378|ref|XM_392354.3|
AGAGGCTCTGCCCGGACGAATACAGCAGACTTCGTGTTCGCCACGGTAAA 2700
**************************************************
apiMel2_modelRefGene_XM_392354
CCAAAGATTAAGACAGAGAGCAAGGATTGCAAGGATACCAGGGAGCTTCG 3995
gi|110756378|ref|XM_392354.3|
CCAAAGATTAAGACAGAGAGCAAGGATTGCAAGGATACCAGGGAGCTTCG 2750
**************************************************
apiMel2_modelRefGene_XM_392354
CGACGCCATTGCATCGGTCACGGAGATGGACTTTAGCGAAGACAAATCCA 4045
gi|110756378|ref|XM_392354.3|
CGACGCCATTGCATCGGTCACGGAGATGGACTTTAGCGAAGACAAATCCA 2800
**************************************************
apiMel2_modelRefGene_XM_392354
TTCTTCATCGCACTCTGTTACAGACAAATGAGAGAGAAAACTCGGCTACT 4095
gi|110756378|ref|XM_392354.3|
TTCTTCATCGCACTCTGTTACAGACAAATGAGAGAGAAAACTCGGCTACT 2850
**************************************************
apiMel2_modelRefGene_XM_392354
CTGACCACCAGCGACGGAGAGCTGAGATTATTTGCATACGACTGCCCCGA 4145
gi|110756378|ref|XM_392354.3|
CTGACCACCAGCGACGGAGAGCTGAGATTATTTGCATACGACTGCCCCGA 2900
**************************************************
apiMel2_modelRefGene_XM_392354
TAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCG 4195
gi|110756378|ref|XM_392354.3|
TAGCTTTAGCGGAAGTGTAACAGTAACGATGGCCGGGAGCACCCAAACCG 2950
**************************************************
apiMel2_modelRefGene_XM_392354
CCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACT 4245
gi|110756378|ref|XM_392354.3|
CCCAAACCGGCAATACCGGCCACGCCACAGTCAACACCAACTCACAAACT 3000
**************************************************
apiMel2_modelRefGene_XM_392354
CACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCC 4295
gi|110756378|ref|XM_392354.3|
CACACTAGTTCTGAGCAACAACTACCCGTGCCCACCCCACTTCACTACCC 3050
**************************************************
apiMel2_modelRefGene_XM_392354
CTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGC 4345
gi|110756378|ref|XM_392354.3|
CTGCAAGATTTGCGGGAAAGTTTTCAACAAAGTGAAAAGCAGAAGCGCGC 3100
**************************************************
apiMel2_modelRefGene_XM_392354
ACATGAAATCCCACAGGCCGGTACCCTCGCCCGATTCAACGGGGCAGGAA 4395
gi|110756378|ref|XM_392354.3|
ACATGAAATCCCACAGGCCGGTACCCTCGCCCGATTCAACGGGGCAGGAA 3150
**************************************************
apiMel2_modelRefGene_XM_392354
TCTAAGAGGCCT---CAGCAGCAA--CAGCAAGCGAG-----CAGCGTTT 4435
gi|110756378|ref|XM_392354.3|
TCTAAGAGGCCTGTCCAACAGCAATCCAAGACGCAACAATCCCAACAATC 3200
************ ** ****** ** * ** *
** * *
apiMel2_modelRefGene_XM_392354
CATCACAGGCCCAAGATTTCAATCAGCAGCAACTGCCTCC--CAGCAACG 4483
gi|110756378|ref|XM_392354.3|
CATC-CAGCAACAGCGTCAACAACAGCAGCAGCAACCGCAAGTACTTATT 3249
**** *** ** * * ******** * ** *
* *
apiMel2_modelRefGene_XM_392354
GCGACACCGGCGCTCAGAACCC--AGCGCATTTATGGCACAATCCGACAC 4531
gi|110756378|ref|XM_392354.3|
GTGTCTTTAGAGATAATTTCTGTAACTGCGATTGTGCTGATTTATGAAAG 3299
* * * * * * * * * ** ** ** *
** *
apiMel2_modelRefGene_XM_392354 GGTTCAGG--CCACCATAG------ 4548
gi|110756378|ref|XM_392354.3| GCTTAAAGAACAATCATACACGTGA 3324
* ** * * * * ****
_______________________________________________
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