By the way, I downloaded "kent" on Sep 27, 2010. 2010/10/27 Woody Lin <[email protected]>
> > Hello Mary, > > Thanks for the reply. I have imported all the tables of hg19 and hgFixed > into MySQL database, and I do have all minimum set of tables required. > Accordingly, it could be because of the gbdb files. Based on the steps of > installation manual on the UCSC genome browser, I don't see how to install > gbdb files. I do find gbDbLoadStep under one of the folders under kent. (see > attached image) Should I "make install it" and move it to cgi-bin or > somewhere else? > > Thank you. > Bests, > Woody > > 2010/10/27 Mary Goldman <[email protected]> > > Hi Woody, >> >> Our best guess is that you are either missing key tables (see below), your >> trackDb table is not up-to-date or your gbdb files are out of sync with your >> MySQL tables. We recommend re-downloading the minimum set of tables required >> for the Genome Browser ( >> http://genomewiki.ucsc.edu/index.php/Minimal_Browser_Installation). >> >> I hope this information is helpful. Please feel free to contact the mail >> list again if you require further assistance. >> >> Best, >> Mary >> ------------------ >> Mary Goldman >> UCSC Bioinformatics Group >> >> ----- Original Message ----- >> From: "Woody Lin" <[email protected]> >> To: [email protected] >> Sent: Tuesday, October 26, 2010 3:37:54 AM GMT -08:00 US/Canada Pacific >> Subject: [Genome] Question about installing genome browser (error: >> wgEncodeGisDnaPet) >> >> Dear all, >> >> I tried to install genome browser (hg19) on my computer, but I came upon >> the >> error message as following and found no solutions on the internet or >> genome >> browser mailing list. >> >> Parent track wgEncodeGisDnaPet of child wgEncodeGisDnaPetViewAlignments >> doesn't exist >> >> Could someone help me how to deal with the problem? Thank you so much! >> >> Bests, >> Woody >> _______________________________________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/mailman/listinfo/genome >> > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
