I read a FAQ about 0-based start coordinates and 1-based end coordinates in refGene file. There are start and end coordinates for transcript, CDS, and exons in refGene file. Do start coordinates of all of these three items using the same stragtegy? I mean the start coordinates of transcirpt, CDS, and exons are using 0-based coordinates and the end coordinates of these are using 1-bsed coordinates?
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