Hi, I used the following instructions to have a list of genes coding only for surface proteins My question: does exist a way to pull down a list of all the surface proteins since a gene can codify for different isoforms?is this step-by-step guide the same ?
>From the Table Browser (http://genome.ucsc.edu/cgi-bin/hgTables?), make the following selections: clade: Mammal genome: Human assembly: hg19 group: knownGene track: UCSC Genes table: knownGene filter: click 'create', scroll down and select "go" under Linked Tables. Scroll down, click on "allow filtering using fields in checked tables". Under go.goaPart based filters, set gold does match GO:0016021. Click submit. output format: selected fields from primary and related tables Click submit then select any appropriate fields. Click 'get output'. Thanks, irene _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
