We've just installed (finally!) from the cvs stable version and the layout of
the page appears corrupted and no region or detail panel appears.
Also, the overview panel comes and goes.
Initially, after installing we had errors about x_cook.js and x_core.js being
missing so I copied them from my Windows install (done with the
GBrowse_netinstall script) and that fixed it.
Now the only message in the error log is this:
[Wed Jan 30 14:26:07 2008] [error] [client 147.158.129.160] Can't use
string ("segment") as a HASH ref while "strict refs" in use at
/usr/lib64/perl5/site_perl/5.8.8/x86_64-linux-thread-multi/Bio/Graphics/Browser.pm
line 874., referer:
http://devgbrowse.agresearch.co.nz/cgi-bin/gbrowse/yeast_chr1/?name=membrane%20trafficking
Also, the version number at the bottom of the page says this:
Generic genome browser version %s
Any ideas?
Is it BioPerl or GBrowse that's borked this time?
Thanx,
Russell Smithies
Bioinformatics Software Developer
T +64 3 489 9085
E [EMAIL PROTECTED]
Invermay Research Centre
Puddle Alley,
Mosgiel,
New Zealand
T +64 3 489 3809
F +64 3 489 9174
www.agresearch.co.nz
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