I've loaded a small file of phastcons results that I generated and I don't see any values in with the wiggle_xyplot and when I use the wiggle_density it is empty. Is there any way to debug that features that are loaded and available to the glyph?
Are there example conf files stanzas for different wiggl data that can be put on the wiki? thanks, -jason On Feb 19, 2008, at 4:33 AM, Sean O'Keeffe wrote: > Hi all, > I'm currently tasked with displaying phastCons data in Gbrowse. I'm > using Bio::Graphics::Wiggle::Loader to load each data set > (chromosome.pp > file). Has anyone done this before or give me an estimate on the time > needed? I started on Friday evening with chr1.pp and it's still > loading > the *.wig file. > chr1.pp is ~1.4GB in size as is chr2.pp but the chromosome size gets > progessively smaller. I've got this this job running on a 6ghz dual > core > linux with 4gb of memory. > > Thanks, > Sean. > > ---------------------------------------------------------------------- > --- > This SF.net email is sponsored by: Microsoft > Defy all challenges. Microsoft(R) Visual Studio 2008. > http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ > _______________________________________________ > Gmod-gbrowse mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse ------------------------------------------------------------------------- This SF.net email is sponsored by: Microsoft Defy all challenges. Microsoft(R) Visual Studio 2008. http://clk.atdmt.com/MRT/go/vse0120000070mrt/direct/01/ _______________________________________________ Gmod-gbrowse mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/gmod-gbrowse
