Hi all, I have shown hydrogen bond formation between guanidino side chain of Arginine and carboxylate in sidechain of Aspartate out my simulation result using g_hbond. Now I see those two residues are well exposed in solvent. Since g_hbond compute hydrogen bonds based on only distance and angles, how I can prove that hydrogen bonds formed between those groups are by overcoming the dielectric medium of waters?
With thanks! B.Nataraj -- raja [EMAIL PROTECTED] -- http://www.fastmail.fm - A fast, anti-spam email service. _______________________________________________ gmx-users mailing list [email protected] http://www.gromacs.org/mailman/listinfo/gmx-users Please don't post (un)subscribe requests to the list. Use the www interface or send it to [EMAIL PROTECTED] Can't post? Read http://www.gromacs.org/mailing_lists/users.php
