Martin Höfling wrote:
Am Dienstag, 26. Juni 2007 schrieb Corina Stratan:
I would like to thank you and David for the answers. By "multiple
programs", I meant batch scripts that contain other
Oh yes, we have runtime limitation of 144h on serial and 24 or 48h on the
large machines. I had to setup several runs over 2 month or so.
So the submitted script was basically calling a python script, calling the
necessary tools to check output, and run the next step. This can be
cumbersome, if it comes to errorhandling (hardware failures etc.)
actually most queueing systems have support for chaining jobs, but if
your hardware fails you're out of luck of course.
Best
Martin
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David.
________________________________________________________________________
David van der Spoel, PhD, Assoc. Prof., Molecular Biophysics group,
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596, 75124 Uppsala, Sweden
phone: 46 18 471 4205 fax: 46 18 511 755
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