vivek sharma wrote:
HI Mark,
thanks for your reply.....
I have gone through the g_hbond -h, and have plotted hbnum.xvg using
-num, which gives me the plot of the number of h_bonds with respect to
time, but can I find out the duration of bond in percent of the
whole trajectory time ?
-hbm gives the existence matrix. You're on your own to add up and divide!
Mark
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