Justin,
2011/11/11 Justin A. Lemkul <jalem...@vt.edu> > > > If the bilayer is splitting across periodic boundaries (I'm assuming > that's what you mean by "pb"), then it's more likely that you placed the > components of your system in an inconvenient way than it is that something > is actually wrong. > Bilayer has moved on Z-dimension in periodic box. That is actually what's happend :) http://i1209.photobucket.com/albums/cc394/own11/vmdscene.gif By the way I'ts intresting that Gmembed has removed 6 lipids in comparison to the inflateglo ( althought I've done all things in accordance to the KALP tutorial because my protein is the same). James
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
