> Removing files in /usr/local/gromacs has no bearing on the contents of > /usr/local/bin. If you did 'make links' at the end of the installation, > you will have dead links in /usr/local/bin that need to be removed, as well. > > -Justin >
Dear Justin, Thanks a lot for your insight. I did links in the end so there is links in */usr/local/bin*. After uninstall I still have dead links with */usr/local/bin. *could you help me how to remove this* *in* **/usr/local/bin*. > > >> >> try make uninstall in the directory where you used make install >> before. like Path_to//gromacs-4.5.5 >> and then make distclean >> for a totally clear re-installation, removed the /gromac-4.5.5 and >> >> re-untar the gromacs-4.5.5.tar.gz >> >> before that, further check the lib and bin have totally removed or not. >> >> >> Sure. I will do now >> >> >> Which OS you are working on? >> >> >> Linux (CentOS 5.7) >> >> Thanks a lot. >> >> >> > >> > >> > On Tue, Jan 24, 2012 at 2:31 AM, lina <[email protected] >> <mailto:lina.lastname@gmail.**com <[email protected]>>> wrote: >> >> >> >> On 24 Jan, 2012, at 1:53, Spring buds <[email protected] >> <mailto:[email protected]>**> wrote: >> >> >> >> > Dear Gromacs users, >> >> > >> >> > Greetings!!! >> >> > >> >> > I am very new users and I am trying to install grmacs 4.5.5 or >> 3.3.3 for >> >> > past four days. But still I am not able to. So I would like to >> ask some >> >> > questions which are below. >> >> > >> >> > >> >> > 1.My laptop is a dual core, which means two processors?.So >> should I need >> >> > to install MPI? >> >> > >> >> --enable threads >> >> >> >> > 2.I installed gromacs 4.5.5 with mistakes. To remove >> installing, I used >> >> > the "which gromacs" and it shows as "/usr/bin/which: no mdrun in >> >> > >> (/usr/kerberos/bin:/usr/local/**bin:/usr/bin:/bin:/usr/X11R6/** >> bin:/home/Malai/bin)". >> >> > However, I used "rm -rf /usr/local/gromacs" to remove >> installing I still can >> >> > see tha gromacs files with red background in "/usr/local/bin". >> Could you >> >> > tell me I removed the gromacs installing? >> >> >> >> You have not. >> >> >> >> > >> >> > 3.Could you please tell me the very simple steps for >> installatios, since >> >> > I am a novice. >> >> >> >> >> http://www.gromacs.org/**Downloads/Installation_**Instructions<http://www.gromacs.org/Downloads/Installation_Instructions> >> >> >> >> > >> >> > Many thanks in advance for your time and help. >> >> > >> >> > Huang Malai >> >> > -- >> >> > gmx-users mailing list [email protected] >> <mailto:[email protected]> >> >> >> > >> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> >> >> > Please search the archive at >> >> > >> http://www.gromacs.org/**Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before >> posting! >> >> > Please don't post (un)subscribe requests to the list. Use the >> >> > www interface or send it to [email protected] >> <mailto:gmx-users-request@**gromacs.org<[email protected]> >> >. >> >> >> > Can't post? Read >> http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >> >> -- >> >> gmx-users mailing list [email protected] >> <mailto:[email protected]> >> >> >> >> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> >> >> Please search the archive at >> >> >> http://www.gromacs.org/**Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before >> posting! >> >> Please don't post (un)subscribe requests to the list. Use the >> >> www interface or send it to [email protected] >> <mailto:gmx-users-request@**gromacs.org<[email protected]> >> >. >> >> >> Can't post? Read >> http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >> > >> > >> > >> > -- >> > gmx-users mailing list [email protected] >> <mailto:[email protected]> >> >> > >> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> >> > Please search the archive at >> > >> http://www.gromacs.org/**Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before >> posting! >> > Please don't post (un)subscribe requests to the list. Use the >> > www interface or send it to [email protected] >> <mailto:gmx-users-request@**gromacs.org<[email protected]> >> >. >> >> > Can't post? Read >> http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >> -- >> gmx-users mailing list [email protected] >> <mailto:[email protected]> >> >> >> http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> >> Please search the archive at >> >> http://www.gromacs.org/**Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before >> posting! >> Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to [email protected] >> <mailto:gmx-users-request@**gromacs.org<[email protected]> >> >. >> >> Can't post? Read >> http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >> >> >> > -- > ==============================**========== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin> > > ==============================**========== > > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > Please don't post (un)subscribe requests to the list. Use the www > interface or send it to [email protected]. > Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >
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