All,

I reloaded our ontology here at MCW on Monday , It seemed to go well via 
phpPgAdmin, but Now I can’t browse our ontology without a “database error”  
coming back .


From: Gpc-dev <[email protected]> on behalf of "Klann, Jeffrey 
G." <[email protected]>
Date: Tuesday, April 11, 2017 at 10:37 PM
To: "[email protected]" <[email protected]>, 
"[email protected]" <[email protected]>, "[email protected]" 
<[email protected]>, "[email protected]" <[email protected]>, 
"[email protected]" <[email protected]>, "[email protected]" 
<[email protected]>
Subject: Re: [gpc-informatics] #280: Medication ontology orgainzed by ingredient

It is *extremely* slow to browse. Can you check your indexes? I’d like to 
explore your hard work but it’s unusable right now.



( I tried a few random other trees and they were also unbrowsably-slow. Is 
there an epidemic of bad indexes on babel? )



Thanks,



Jeffrey Klann, PhD

Instructor of Medicine, Harvard Medical School

Instructor in Investigation, Massachusetts General Hospital





On 4/11/17, 12:00 PM, "GPC Informatics" 
<[email protected]<mailto:[email protected]>> wrote:



    #280: Medication ontology orgainzed by ingredient

    -------------------------+----------------------------

     Reporter:  preeder      |       Owner:  jay.pedersen

         Type:  enhancement  |      Status:  assigned

     Priority:  major        |   Milestone:  snow-shrine-2

    Component:  data-stds    |  Resolution:

     Keywords:               |  Blocked By:

     Blocking:               |

    -------------------------+----------------------------



    Comment (by dconnolly):



     Replying to [comment:19 campbell]:

     > SCILHS/Medication metadata issues addressed with load to BABEL toiday:



     Which folder has the updated medication metadata? is it **UNMC:

     Medications (UNMC)**?



     > •     (therefore) with VA drug classes as sole top-level ontology, not

     all clinical formulations or packages can be deployed



     So this is a wholesale re-organization of the ontology?



     If you can share the code you used to build it, please do.



    --

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    gpc-informatics 
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