On 12/10/18 21:10, Jamille Haarloo wrote:
Markus. i.segment finished without giving an error.
Moritz,
I am back at the older error. I've seen this error documented online as
a result of 'unaccepted' column-names. I tried to keep the name of the
input maps for the statistics as short and simple possible (without dots
etc).
i.segment.stats -n map=SegW24IDM4DV4@LUP1
rasters=DV2@LUP1,DV4@LUP1,IDM2@LUP1,IDM4@LUP1,W2@LUP1,W4@LUP1
raster_statistics=mean,stddev,variance,coeff_var,first_quart,median,third_quart,perc_90
area_measures=compact_circle
csvfile=C:\Users\haarlooj\Stats_SegW24IDM4DV4_11okt18
vectormap=vSegW24IDM4DV4 processes=2
Calculating geometry statistics...
Calculating statistics for raster maps...
Calculating neighborhood statistics...
Creating output vector map...
DBMI-SQLite driver error:
Error in sqlite3_prepare():
near "IDM4_third_qu": syntax error
ERROR: Error while executing: 'CREATE TABLE segmstat_tmp_vect_12816 (cat
int, compact_circle double precision, DV2_mean double precision,
DV2_stddev double precision, DV2_variance double precision,
DV2_coeff_var double precision, DV2_first_quart double precision,
DV2_median double precision, DV2_third_quart double precision,
DV2_perc_90 double precision, DV4_mean double precision, DV4_stddev
double precision, DV4_variance double precision, DV4_coeff_var double
precision, DV4_first_quart double precision, DV4_median double
precision, DV4_third_quart double precision, DV4_perc_90 double
precision, IDM2_mean double precision, IDM2_stddev double precision,
IDM2_variance double precision, IDM2_coeff_var double precision,
IDM2_first_quart double precision, IDM2_median double precision,
IDM2_third_quart double precision, IDM2_perc_90 double precision,
IDM4_mean double precision, IDM4_stddev double precision, IDM4_variance
double precision, IDM4_coeff_var double precision, IDM4_first_quart
double precision, IDM4_median double precision, IDM4_third_quart double
precision, IDM4_perc_90 double precision, W2_mean double precision,
W2_stddev double precision, W2_variance double precision, W2_coeff_var
double precision, W2_first_quart double precision, W2_median double
precision, W2_third_quart double precision, W2_perc_90 double precision,
W4_mean double precision, W4_stddev double precision, W4_variance double
precision, W4_coeff_var double precision, W4_first_quart double
precision, W4_median double precision, W4_third_quart double precision,
W4_perc_90 double precision, neighbors_count double precision,
compact_circle_nbrmean double precision, compact_circle_nbrstddev double
precision, DV2_mean_nbrmean double precision, DV2_mean_nbrstddev double
precision, DV2_stddev_nbrmean double precision, DV2_stddev_nbrstddev
double precision, DV2_variance_nbrmean double precision,
DV2_variance_nbrstddev double precision, DV2_coeff_var_nbrmean double
precision, DV2_coeff_var_nbrstddev double precision,
DV2_first_quart_nbrmean double precision, DV2_first_quart_nbrstddev
double precision, DV2_median_nbrmean double precision,
DV2_median_nbrstddev double precision, DV2_third_quart_nbrmean double
precision, DV2_third_quart_nbrstddev double precision,
DV2_perc_90_nbrmean double precision, DV2_perc_90_nbrstddev double
precision, DV4_mean_nbrmean double precision, DV4_mean_nbrstddev double
precision, DV4_stddev_nbrmean double precision, DV4_stddev_nbrstddev
double precision, DV4_variance_nbrmean double precision,
DV4_variance_nbrstddev double precision, DV4_coeff_var_nbrmean double
precision, DV4_coeff_var_nbrstddev double precision,
DV4_first_quart_nbrmean double precision, DV4_first_quart_nbrstddev
double precision, DV4_median_nbrmean double precision,
DV4_median_nbrstddev double precision, DV4_third_quart_nbrmean double
precision, DV4_third_quart_nbrstddev double precision,
DV4_perc_90_nbrmean double precision, DV4_perc_90_nbrstddev double
precision, IDM2_mean_nbrmean double precision, IDM2_mean_nbrstddev
double precision, IDM2_stddev_nbrmean double precision,
IDM2_stddev_nbrstddev double precision, IDM2_variance_nbrmean double
precision, IDM2_variance_nbrstddev double precision,
IDM2_coeff_var_nbrmean double precision, IDM2_coeff_var_nbrstddev double
precision, IDM2_first_quart_nbrmean double precision,
IDM2_first_quart_nbrstddev double precision, IDM2_median_nbrmean double
precision, IDM2_median_nbrstddev double precision,
IDM2_third_quart_nbrmean double precision, IDM2_third_quart_nbrstddev
double precision, IDM2_perc_90_nbrmean double precision,
IDM2_perc_90_nbrstddev double precision, IDM4_mean_nbrmean double
precision, IDM4_mean_nbrstddev double precision, IDM4_stddev_nbrmean
double precision, IDM4_stddev_nbrstddev double precision,
IDM4_variance_nbrmean double precision, IDM4_variance_nbrstddev double
precision, IDM4_coeff_var_nbrmean double precision,
IDM4_coeff_var_nbrstddev double precision, IDM4_first_quart_nbrmean
double precisDBMI-SQLite driver error > Error in sqlite3_prepare():
near "IDM4_third_qu": syntax error
Hmm. Maybe the string just gets too long.
I have to think about how to split this up into several calls.
Could you try without -n (i.e. without the neighborhood statistics) just
to make sure this works ?
Moritz
ion, IDM4_first_quart_nbrstddev double precision, IDM4_median_nbrmean
double precision, IDM4_median_nbrstddev double precision, IDM4_third_qu'
Traceback (most recent call last):
File "C:\Users\haarlooj\AppData\Roaming\GRASS7\addons/scri
pts/i.segment.stats.py <http://i.segment.stats.py>", line 370, in <module>
main()
File "C:\Users\haarlooj\AppData\Roaming\GRASS7\addons/scri
pts/i.segment.stats.py <http://i.segment.stats.py>", line 357, in main
gscript.run_command('db.execute', input=insert_sql,
quiet=True)
File "C:\Program Files\GRASS GIS
7.6.svn\etc\python\grass\script\core.py", line 423, in
run_command
return handle_errors(returncode, returncode, args,
kwargs)
File "C:\Program Files\GRASS GIS
7.6.svn\etc\python\grass\script\core.py", line 334, in
handle_errors
returncode=returncode)
grass.exceptions.CalledModuleError: Module run None
['db.execute', '--q', 'input=Z:\\GRASS_GIS\\Cottica_LUP\\LUP
1\\.tmp/unknown\\12816.1'] ended with error
Process ended with non-zero return code 1. See errors in the
(error) output.
(Thu Oct 11 18:33:18 2018) Command finished (99 min 25 sec)
On Thu, Oct 11, 2018 at 4:23 PM Moritz Lennert
<[email protected] <mailto:[email protected]>> wrote:
On 11/10/18 19:42, Jamille Haarloo wrote:
> Markus, that's great! I will install the latest version and retry. I
> will report next Monday.
>
> Thanks Moritz. The spaces and '&' in paths of output files did
not give
> problems before, but I retried without the spaces and '&' just in
case.
> i.segment.stats -n --overwrite map=SegmW24IDM4DV4@LUP1
> rasters=W2@LUP1,W4@LUP1,DV2@LUP1,DV4@LUP1,IDM2@LUP1,IDM4@LUP1
>
raster_statistics=mean,stddev,variance,coeff_var,first_quart,median,third_quart,perc_90
> area_measures=compact_circle
>
csvfile=Z:\grass_cmd_output-i.segment.statsSegmWV24IDM4DV4_11okt2018.txt
> vectormap=VSegmWV24IDM4DV4 processes=4
> Calculating geometry statistics...
> Calculating statistics for raster maps...
> Calculating neighborhood statistics...
> Traceback (most recent call last):
> File "C:\Users\haarlooj\AppData\Roaming\GRASS7\addons/scri
> pts/i.segment.stats.py <http://i.segment.stats.py>
<http://i.segment.stats.py>", line 370, in <module>
> main()
> File "C:\Users\haarlooj\AppData\Roaming\GRASS7\addons/scri
> pts/i.segment.stats.py <http://i.segment.stats.py>
<http://i.segment.stats.py>", line 282, in main
> quiet=True).splitlines()])
> File "C:\Program Files\GRASS GIS
> 7.6.svn\etc\python\grass\script\core.py", line 478, in
> read_command
> return handle_errors(returncode, stdout, args, kwargs)
> File "C:\Program Files\GRASS GIS
> 7.6.svn\etc\python\grass\script\core.py", line 334, in
> handle_errors
> returncode=returncode)
> grass.exceptions.CalledModuleError: Module run None
> ['r.neighborhoodmatrix', '--q', '-d',
> 'input=SegmW24IDM4DV4@LUP1'] ended with error
Try reinstalling r.neighborhoodmatrix with g.extension.
Moritz
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