Actually... yes, I may have spoken too soon... I can see Gromacs on my machine, but I am still struggling to get it to run properly.
I cannot convince cygwin to source the gromacs files properly (well, at least I think that's the problem). When I enter "luck" into the command line it returns the "luck: command not found" error message. Also, both commands I have entered (pdb2gmx and mdrun) have returned the following error: /usr/local/gromacs/bin/pdb2gmx.exe: error while loading shared libraries: cyggmxpreprocess-8.dll: cannot open shared object file: No such file or directory Maybe I was not as successful as I thought with the install? Thanks so much for your help, Kelly ________________________________ From: Mirco Wahab [via GROMACS] [ml-node+s5086n5013319...@n6.nabble.com] Sent: Friday, December 13, 2013 2:18 PM To: Summers, Kelly Subject: Re: Installing Gromacs 4.6.3 using Cygwin On 13.12.2013 18:01, chem grad wrote: > Thank you so much! > Gromacs seems to be installed properly now. but mdrun doesn't work, right? M. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to [hidden email]<UrlBlockedError.aspx>. ________________________________ If you reply to this email, your message will be added to the discussion below: http://gromacs.5086.x6.nabble.com/Installing-Gromacs-4-6-3-using-Cygwin-tp5013268p5013319.html To unsubscribe from Installing Gromacs 4.6.3 using Cygwin, click here<http://gromacs.5086.x6.nabble.com/template/NamlServlet.jtp?macro=unsubscribe_by_code&node=5013268&code=a2VsbHkuc3VtbWVyc0B1c2Fzay5jYXw1MDEzMjY4fDEyMjg5Mzc5NTI=>. NAML<http://gromacs.5086.x6.nabble.com/template/NamlServlet.jtp?macro=macro_viewer&id=instant_html%21nabble%3Aemail.naml&base=nabble.naml.namespaces.BasicNamespace-nabble.view.web.template.NabbleNamespace-nabble.view.web.template.NodeNamespace&breadcrumbs=notify_subscribers%21nabble%3Aemail.naml-instant_emails%21nabble%3Aemail.naml-send_instant_email%21nabble%3Aemail.naml> -- View this message in context: http://gromacs.5086.x6.nabble.com/Installing-Gromacs-4-6-3-using-Cygwin-tp5013268p5013320.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.