rekado pushed a commit to branch master
in repository guix.
commit 8caab758834cc6e6c3c664e7c7cb138662413fb0
Author: Ricardo Wurmus <[email protected]>
AuthorDate: Sat Jun 5 01:47:52 2021 +0200
gnu: Add r-ggtree.
* gnu/packages/bioconductor.scm (r-ggtree): New variable.
---
gnu/packages/bioconductor.scm | 36 ++++++++++++++++++++++++++++++++++++
1 file changed, 36 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 10463b2..d779a11 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -5707,6 +5707,42 @@ heterogeneous associated data to a single tree file and
can be served as a
platform for merging tree with associated data and converting file formats.")
(license license:artistic2.0)))
+(define-public r-ggtree
+ (package
+ (name "r-ggtree")
+ (version "3.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ggtree" version))
+ (sha256
+ (base32
+ "0i665b5jxgsv3ncxmczy7n0h911br44dw9f7m4jwv3pjmr5mm6vk"))))
+ (properties `((upstream-name . "ggtree")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ape" ,r-ape)
+ ("r-aplot" ,r-aplot)
+ ("r-dplyr" ,r-dplyr)
+ ("r-ggplot2" ,r-ggplot2)
+ ("r-magrittr" ,r-magrittr)
+ ("r-purrr" ,r-purrr)
+ ("r-rlang" ,r-rlang)
+ ("r-rvcheck" ,r-rvcheck)
+ ("r-scales" ,r-scales)
+ ("r-tidyr" ,r-tidyr)
+ ("r-tidytree" ,r-tidytree)
+ ("r-treeio" ,r-treeio)))
+ (native-inputs `(("r-knitr" ,r-knitr)))
+ (home-page "https://yulab-smu.top/treedata-book/";)
+ (synopsis "R package for visualization of trees and annotation data")
+ (description
+ "This package extends the ggplot2 plotting system which implements a
+grammar of graphics. ggtree is designed for visualization and annotation of
+phylogenetic trees and other tree-like structures with their annotation
+data.")
+ (license license:artistic2.0)))
+
(define-public r-biocsingular
(package
(name "r-biocsingular")
