This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new a710ebec1d gnu: Add r-memes.
a710ebec1d is described below
commit a710ebec1d70d78dd8b84689388a0b670aafa745
Author: nafkhamdc <[email protected]>
AuthorDate: Fri May 3 09:19:33 2024 +0000
gnu: Add r-memes.
* gnu/packages/bioconductor.scm (r-memes): New variable.
Change-Id: Ibdf5173d35ef81d27da6831148e66be83f856deb
Signed-off-by: Ricardo Wurmus <[email protected]>
---
gnu/packages/bioconductor.scm | 48 +++++++++++++++++++++++++++++++++++++++++++
1 file changed, 48 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 0fca094977..1a8d9b91d2 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2092,6 +2092,54 @@ gene expression indicate a role for enhancer priming in
immune response\", publi
in Nature Genetics, January 2018.")
(license license:gpl2+)))
+;; This is available only in the devel branch of Bioconductor.
+(define-public r-memes
+ (let ((commit "55f0df1fe65c8ead5252542fdc0da0ff2339049e")
+ (revision "1"))
+ (package
+ (name "r-memes")
+ (version (git-version "1.11.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/snystrom/memes";)
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0mp3a610v293prmyid3w1w8fkjkppjnim60h7p9vz2884d0wdvk4"))))
+ (properties `((upstream-name . "memes")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biostrings
+ r-cmdfun
+ r-dplyr
+ r-genomicranges
+ r-ggplot2
+ r-ggseqlogo
+ r-magrittr
+ r-matrixstats
+ r-patchwork
+ r-processx
+ r-purrr
+ r-readr
+ r-rlang
+ r-tibble
+ r-tidyr
+ r-universalmotif
+ r-usethis
+ r-xml2))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/snystrom/memes";)
+ (synopsis
+ "Motif matching, comparison, and de novo discovery using the MEME
Suite")
+ (description
+ "This package facilitates motif analysis using MEME Suite tools.
+Memes provides data aware utilities for using GRanges objects as
+entrypoints to motifanalysis, data structures for examining & editing
+motif lists, and novel data visualizations. Memes functions and data
+structures are amenable to both base R and tidyverse workflows.")
+ (license license:expat))))
+
(define-public r-methylclockdata
(package
(name "r-methylclockdata")
