guix_mirror_bot pushed a commit to branch master
in repository guix.
commit 27b649406950457fe845068f08839898c042812a
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Mon Jul 21 15:54:41 2025 +0100
gnu: Add python-hierarc.
* gnu/packages/astronomy.scm (python-hierarc): New variable.
Change-Id: Idb9d8d90ccc00d40b28edeb27e3fd35536b29c4a
---
gnu/packages/astronomy.scm | 61 ++++++++++++++++++++++++++++++++++++++++++++++
1 file changed, 61 insertions(+)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index e28559e227..da3caa9129 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -4340,6 +4340,67 @@ is based on the Hierarchical Equal Area isoLatitude
Pixelization (HEALPix)
scheme and builds with the HEALPix C++ library.")
(license license:gpl2+)))
+(define-public python-hierarc
+ (package
+ (name "python-hierarc")
+ (version "1.2.0")
+ (source
+ (origin
+ (method git-fetch) ;no tests data in the PyPI archive
+ (uri (git-reference
+ (url "https://github.com/sibirrer/hierArc";)
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "02078a745hrb3m8fj739rwzk4wwxrfk40sr4yvs722aj5xk8j00w"))))
+ (build-system pyproject-build-system)
+ (arguments
+ (list
+ #:test-flags
+ ;; Some tests are computation intensive and not thread safe, failing
+ ;; during parallel invocation:
+ ;; 109 passed, 32 deselected, 43 warnings in 634.59s
+ #~(list "--durations" "5"
+ ;; AttributeError: 'LambdaCDM' object has no attribute '_Ok0'.
+ "-k" (string-join
+ (list "not test_cosmo_instance"
+ "test_kde_likelihood_integration"
+ "test_log_likelihood"
+ "test_mcmc_emcee"
+ "test_sne_likelihood_integration")
+ " and not "))
+ #:phases
+ #~(modify-phases %standard-phases
+ (add-before 'check 'pre-check
+ (lambda _
+ ;; RuntimeError: cannot cache function 'rotate': no locator
+ ;; available for file '<...>/lenstronomy/Util/util.py'.
+ (setenv "NUMBA_CACHE_DIR" "/tmp"))))))
+ (native-inputs
+ (list python-pytest
+ python-setuptools
+ python-wheel))
+ (propagated-inputs
+ (list python-astropy
+ python-emcee
+ python-h5py
+ python-lenstronomy
+ python-matplotlib
+ python-mpmath
+ python-numpy
+ python-pandas
+ python-scikit-learn
+ python-scipy))
+ (home-page "https://github.com/sibirrer/hierarc";)
+ (synopsis "Hierarchical analysis of strong lensing systems")
+ (description
+ "This package implements a funtionality for hierarchical analysis of
+strong lensing systems to infer lens properties and cosmological parameters
+simultaneously. It allows to fit lenses with measured time delays, imaging
+information, kinematics constraints and standardizable magnifications with
+parameters described on the ensemble level.")
+ (license license:bsd-3)))
+
(define-public python-holodeck
(package
(name "python-holodeck")
