guix_mirror_bot pushed a commit to branch master
in repository guix.
commit 51e8d1cb9521075c775ada2345fc3054a1f0cd2b
Author: Sharlatan Hellseher <[email protected]>
AuthorDate: Thu Aug 7 11:21:46 2025 +0100
gnu: salmon: Update to 1.10.3, fix build.
* gnu/packages/bioinformatics.scm (salmon): Update to 1.10.3.
[inputs]: Update pufferfish sources.
Change-Id: Iba95cc2bc61bbd8bddd1c9b679c9705e260a1364
---
gnu/packages/bioinformatics.scm | 7 ++++---
1 file changed, 4 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index e90d827bfe..7fd142cd19 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -29,6 +29,7 @@
;;; Copyright © 2024 Spencer King <[email protected]>
;;; Copyright © 2025 nomike Postmann <[email protected]>
;;; Copyright © 2025 Janneke Nieuwenhuizen <[email protected]>
+;;; Copyright © 2025 Sharlatan Hellseher <[email protected]>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -17034,7 +17035,7 @@ The following file formats are supported:
(define-public salmon
(package
(name "salmon")
- (version "1.10.1")
+ (version "1.10.3")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -17043,7 +17044,7 @@ The following file formats are supported:
(file-name (git-file-name name version))
(sha256
(base32
- "0grpcajxf2bch4b74zb66pdssda8yc7jvxj5ckaw0xvw1605rpcj"))
+ "0vii7nlx0ddn62qniwx4abfj6ajwl3w6mizavpa0mkhpxnm06rqw"))
(modules '((guix build utils)))
(snippet
;; Delete bundled headers for eigen3.
@@ -17158,7 +17159,7 @@ The following file formats are supported:
(file-name (git-file-name "pufferfish" version))
(sha256
(base32
-
"0fcv5rd2k4fabsg489sjfxgjisivhwk1w26gfc88rgpszdkcla36"))))))
+
"0h12h4wv7k3if1m6as7wvrbd7djm0zsg1vs0xn84bnrswwv5z2l3"))))))
(home-page "https://github.com/COMBINE-lab/salmon";)
(synopsis "Quantification from RNA-seq reads using lightweight alignments")
(description "Salmon is a program to produce highly-accurate,
