28/360: gnu: r-summarizedexperiment: Update to 1.40.0.

[guix-commits]

guix_mirror_bot pushed a commit to branch r-team
in repository guix.

commit cc1c0decbbb137c93f1924961db1264a6b3ea6f1
Author: Ricardo Wurmus <rek...@elephly.net>
AuthorDate: Tue Nov 25 13:48:16 2025 +0100

    gnu: r-summarizedexperiment: Update to 1.40.0.
    
    * gnu/packages/bioconductor.scm (r-summarizedexperiment): Update to 1.40.0.
    [propagated-inputs]: Remove r-genomeinfodb; add r-seqinfo.
    
    Change-Id: I76ba49cee97aa7f45577c9cca0972d610d218c20
---
 gnu/packages/bioconductor.scm | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index cbed7417fa..4962ca8f35 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -14728,13 +14728,13 @@ involving two separate genomic loci encoded as 
GRanges objects.")
 (define-public r-summarizedexperiment
   (package
     (name "r-summarizedexperiment")
-    (version "1.38.1")
+    (version "1.40.0")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "SummarizedExperiment" version))
               (sha256
                (base32
-                "1f48vjcfz3cb1kdsbwjik32z9bbkdmlmlpx895p1v875dxwwlp70"))))
+                "1xmlfrdhzlbsd23warfdm5iscm61r29jxridv8krv16b95l4axk9"))))
     (properties
      `((upstream-name . "SummarizedExperiment")
        (updater-extra-native-inputs . ("r-runit"))))
@@ -14753,13 +14753,13 @@ involving two separate genomic loci encoded as 
GRanges objects.")
      (list r-biobase
            r-biocgenerics
            r-delayedarray
-           r-genomeinfodb
            r-genomicranges
            r-iranges
            r-matrix
            r-matrixgenerics
            r-s4arrays
-           r-s4vectors))
+           r-s4vectors
+           r-seqinfo))
     (native-inputs
      (list r-digest r-knitr r-runit))
     (home-page "https://bioconductor.org/packages/SummarizedExperiment";)