Dear HCP team members, We are trying to do structural and resting resting state analysis using data from lifespan project. Since the usage of HCP pipelines (https://github.com/Washington-University/Pipelines/wiki/v3.4.0-Release-Notes,-Installation,-and-Usage) is for example data set we get the following error after 40 mins of running Prefreesurfer analysis:
Cannot open volume /home/xxx/xxx/xxx/HCP_data//LS2001/unprocessed/3T/T1w_MPR 1/LS2001_3T_FieldMap_Magnitude for reading! For reference when I looked up for the same volume in folderT1w of example dataset it had a FieldMap_Magnitude file but the same file of fieldMap_Magnitude file is not there in T1 or T2 folder of the life span dataset. Can you please let me know what should I do to get the HCPPipelines running again for the downloaded data from the lifespan project?? Will appreciate any input. Thanks and regards, Sampada -- Sampada Sinha Post-doctoral associate University of Minnesota (East Bank) Molecular and neuroimaging laboratory Department of Psychiatry Minneapolis-55415 Phone number: 718-913-0636 email: [email protected] : [email protected] Interest: Neuroimaging, DTI, rsfMRI, tfMRI _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
