Re: [HCP-Users] prepare_level2_feat_analysis.sh

[Glasser, Matthew]

Why are you doing it this way instead of just using the already analyzed task fMRI data? Peace, Matt. From: <hcp-users-boun...@humanconnectome.org> on behalf of Mohamad Reza Khodai <mo7278231r...@yahoo.com> Reply-To: Mohamad Reza Khodai <mo7278231r...@yahoo.com> Date: Sunday, July 26, 2015 at 11:00 AM To: "hcp-users@humanconnectome.org" <hcp-users@humanconnectome.org>, Mohamad Reza Khodai <mo7278231r...@yahoo.com> Subject: [HCP-Users] prepare_level2_feat_analysis.sh Dear HCP users I am trying to perform a 2nd level GLM analyis(using fsl) on fMRI working memory data. In order to do that,i need to have a registration folder. I noticed that there is a bash file for this propose. So i downloaded ''prepare_level2_feat_analysis.sh'' file. I tried to run this file using commands bellow : chmod +x prepare_level2_feat_analysis.sh ./prepare_level2_feat_analysis.sh but i got the following results: The input must be a fsf file Usage: prepare_level2_feat_analysis.sh <Level2_fsf_file> Prepares lower-level .feat directories for higher-level analyses Any ideas? regards Mohammad _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users   The materials in this message are private and may contain Protected Healthcare Information or other information of a sensitive nature. If you are not the intended recipient, be advised that any unauthorized use, disclosure, copying or the taking of any action in reliance on the contents of this information is strictly prohibited. If you have received this email in error, please immediately notify the sender via telephone or return mail. _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users