I've just replied to this in the FSL mailing list. Looks like a bug, hopefully fixable soon...
On 6 December 2017 at 07:10, Dev vasu <[email protected]> wrote: > Dear all , > > > I am using PALM in order to perform Two sample Unpaired T test for my > group study . > > I followed the instructions provided in PALM examples working with CIFTI > files. > > When i am running the palm i am incurring following error > > > 1. palm -i L_IX_AB_sub.nii -d design.mat -t design.con -o AB_sub -T -logp > > > " Reading input 1/1: L_IX_AB_sub.nii > Undefined function or variable 'Y'. > > Error in palm_ready (line 141) > ynan = any(isnan(Y),1); > > Error in palm_takeargs (line 1599) > palm_ready(opts.i{i},maskstruct,opts,true); > > Error in palm_core (line 33) > [opts,plm] = palm_takeargs(varargin{:}); > > Error in palm (line 81) > palm_core(varargin{:}); > " > > 2. palm -i -i L_IX_L_AB.func.gii -d design.mat -t design.con -o AB_L -T > -tfce2D -s L_midthickness_AB.func.gii L_area_AB.func.gii -logp > > > " Found SPM in /home/vasudev/Documents/spm12 > Found HCP Workbench executable in /usr/bin/wb_command > Loading surface 1/1: L_midthickness_AB.func.gii > Reading input 1/1: L_IX_L_AB.func.gii > Struct contents reference from a non-struct array object. > > Error in palm_takeargs (line 1633) > if any(size(plm.srf{s}.data.vtx,1) == ... > > Error in palm_core (line 33) > [opts,plm] = palm_takeargs(varargin{:}); > > Error in palm (line 81) > palm_core(varargin{:}); > > > Is there any reason why i am experiencing these error, why is it PALM > unable to read Input files ?. > > Thanks > Vasudev > > _______________________________________________ > HCP-Users mailing list > [email protected] > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list [email protected] http://lists.humanconnectome.org/mailman/listinfo/hcp-users
