That is the uncleaned NIFTI data.
${StudyFolder}/${Subject}/MNINonLinear/Results/${fMRIName}/${fMRIName}_hp2000_clean.nii.gz
is the cleaned data.
Peace,
Matt.
From: redhatw <redh...@gmail.com<mailto:redh...@gmail.com>>
Date: Monday, February 19, 2018 at 1:24 PM
To: Matt Glasser <glass...@wustl.edu<mailto:glass...@wustl.edu>>,
"hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>"
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: Re: [HCP-Users] hcp preprocessed data in MNI space
Hi Matt,
Thanks for sharing. Does that mean I have to download the data again (the
extended package)? what is the file " rfMRI_REST1_LR.nii.gz "?
Best
Ze
On Mon, Feb 19, 2018 at 2:20 PM, Glasser, Matthew
<glass...@wustl.edu<mailto:glass...@wustl.edu>> wrote:
This is available in the extended packages, however in general it is not
recommended to compare cortical data across subjects or studies in MNI space or
to smooth the data in the volume. The reasons why are covered here:
https://www.biorxiv.org/content/early/2018/01/29/255620
Peace,
Matt.
From:
<hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@humanconnectome.org>>
on behalf of redhatw <redh...@gmail.com<mailto:redh...@gmail.com>>
Date: Monday, February 19, 2018 at 1:11 PM
To: "hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>"
<hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org>>
Subject: [HCP-Users] hcp preprocessed data in MNI space
Dear HCPers,
I'm looking for a way to get the preprocessed rsfMRI data in the MNI
space. I have only downloaded the preprocessed data, are there any tool to
generate that or back-project the MSMAll.dtseries.nii into MNI space?
Also, is this file
rfMRI_REST1_LR.nii.gz
already preprocessed? I noticed that it is in the MNI space.
Thanks
Ze
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